Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTSDP07339 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTSDP07339 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
CTSDP07339 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.04□□□□□ -1.76
CTSDP07339 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.04□□□□□ -1.76
CTSDP07339 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTSDP07339 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.04□□□□□ -1.76
CTSDP07339 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTSDP07339 RNU1-20P-201ENST00000363314 162 ntBASIC4.04□□□□□ -1.76
CTSDP07339 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CTSDP07339 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.04□□□□□ -1.76
CTSDP07339 AL021331.1-201ENST00000402817 582 ntBASIC4.04□□□□□ -1.76
CTSDP07339 AL136116.2-201ENST00000404020 785 ntBASIC4.04□□□□□ -1.76
CTSDP07339 AL080315.1-201ENST00000406055 466 ntBASIC4.04□□□□□ -1.76
CTSDP07339 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.04□□□□□ -1.76
CTSDP07339 RNA5SP146-201ENST00000410743 123 ntBASIC4.04□□□□□ -1.76
CTSDP07339 RNU2-22P-201ENST00000411266 212 ntBASIC4.04□□□□□ -1.76
CTSDP07339 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.04□□□□□ -1.76
CTSDP07339 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.04□□□□□ -1.76
CTSDP07339 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.04□□□□□ -1.76
CTSDP07339 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CTSDP07339 AC108075.1-201ENST00000424692 529 ntBASIC4.04□□□□□ -1.76
CTSDP07339 SPRYD7P1-201ENST00000443861 570 ntBASIC4.04□□□□□ -1.76
CTSDP07339 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.04□□□□□ -1.76
CTSDP07339 OR2AO1P-201ENST00000476497 403 ntBASIC4.04□□□□□ -1.76
CTSDP07339 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.04□□□□□ -1.76
CTSDP07339 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.04□□□□□ -1.76
CTSDP07339 RNU6-709P-201ENST00000517257 104 ntBASIC4.04□□□□□ -1.76
CTSDP07339 CYCSP28-201ENST00000534284 321 ntBASIC4.04□□□□□ -1.76
CTSDP07339 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTSDP07339 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CTSDP07339 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.04□□□□□ -1.76
CTSDP07339 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.04□□□□□ -1.76
CTSDP07339 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.04□□□□□ -1.76
CTSDP07339 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.04□□□□□ -1.76
CTSDP07339 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CTSDP07339 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.04□□□□□ -1.76
CTSDP07339 AL592182.3-201ENST00000642132 3304 ntBASIC4.04□□□□□ -1.76
CTSDP07339 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTSDP07339 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CTSDP07339 AC027279.1-201ENST00000568885 4284 ntBASIC4.04□□□□□ -1.76
CTSDP07339 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.03□□□□□ -1.76
CTSDP07339 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.03□□□□□ -1.76
CTSDP07339 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTSDP07339 AC008758.3-201ENST00000507003 1829 ntBASIC4.03□□□□□ -1.76
CTSDP07339 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTSDP07339 RN7SKP160-201ENST00000363804 340 ntBASIC4.03□□□□□ -1.76
CTSDP07339 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTSDP07339 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTSDP07339 MIR921-201ENST00000401133 56 ntBASIC4.03□□□□□ -1.76
CTSDP07339 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.03□□□□□ -1.76
CTSDP07339 RPL7L1P9-201ENST00000431298 745 ntBASIC4.03□□□□□ -1.76
CTSDP07339 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.03□□□□□ -1.76
CTSDP07339 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.03□□□□□ -1.76
CTSDP07339 AL591363.1-201ENST00000450091 483 ntBASIC4.03□□□□□ -1.76
CTSDP07339 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.03□□□□□ -1.76
CTSDP07339 RPL23AP65-201ENST00000475608 468 ntBASIC4.03□□□□□ -1.76
CTSDP07339 RN7SL41P-201ENST00000476144 297 ntBASIC4.03□□□□□ -1.76
CTSDP07339 RPL7P39-201ENST00000481157 744 ntBASIC4.03□□□□□ -1.76
CTSDP07339 STMN1P2-201ENST00000508435 439 ntBASIC4.03□□□□□ -1.76
CTSDP07339 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.03□□□□□ -1.76
CTSDP07339 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.03□□□□□ -1.76
CTSDP07339 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.03□□□□□ -1.76
CTSDP07339 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.03□□□□□ -1.76
CTSDP07339 AC011270.1-201ENST00000558606 583 ntBASIC4.03□□□□□ -1.76
CTSDP07339 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTSDP07339 TVP23CP2-201ENST00000571473 623 ntBASIC4.03□□□□□ -1.76
CTSDP07339 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.03□□□□□ -1.76
CTSDP07339 EIF1P5-201ENST00000585002 234 ntBASIC4.03□□□□□ -1.76
CTSDP07339 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.03□□□□□ -1.76
CTSDP07339 AC130352.1-201ENST00000602979 661 ntBASIC4.03□□□□□ -1.76
CTSDP07339 AC133552.5-201ENST00000604266 540 ntBASIC4.03□□□□□ -1.76
CTSDP07339 AC026979.4-201ENST00000606555 645 ntBASIC4.03□□□□□ -1.76
CTSDP07339 AC091979.2-201ENST00000607514 214 ntBASIC4.03□□□□□ -1.76
CTSDP07339 RNU6-84P-201ENST00000607737 102 ntBASIC4.03□□□□□ -1.76
CTSDP07339 MIR6768-201ENST00000610734 72 ntBASIC4.03□□□□□ -1.76
CTSDP07339 MIR6837-201ENST00000620884 64 ntBASIC4.03□□□□□ -1.76
CTSDP07339 AC087821.1-201ENST00000623639 567 ntBASIC4.03□□□□□ -1.76
CTSDP07339 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CTSDP07339 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CTSDP07339 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTSDP07339 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTSDP07339 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTSDP07339 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTSDP07339 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CTSDP07339 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTSDP07339 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CTSDP07339 OR14L1P-202ENST00000641545 3009 ntBASIC4.03□□□□□ -1.77
CTSDP07339 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.03□□□□□ -1.77
CTSDP07339 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.02□□□□□ -1.77
CTSDP07339 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTSDP07339 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTSDP07339 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.02□□□□□ -1.77
CTSDP07339 AL672167.1-203ENST00000641299 2975 ntBASIC4.02□□□□□ -1.77
CTSDP07339 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTSDP07339 AC104118.1-201ENST00000607625 1589 ntBASIC4.02□□□□□ -1.77
CTSDP07339 CASC19-281ENST00000642118 1554 ntBASIC4.02□□□□□ -1.77
CTSDP07339 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTSDP07339 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.02□□□□□ -1.77
CTSDP07339 AP001002.1-201ENST00000625148 1513 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms