Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 RN7SKP66-201ENST00000516681 231 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC092490.3-201ENST00000545370 572 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC073111.2-201ENST00000605657 1075 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AL021707.7-201ENST00000607991 416 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AL159169.2-201ENST00000610061 1269 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 MIR6839-201ENST00000620425 113 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC006249.1-201ENST00000621223 471 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AL034549.2-201ENST00000618285 3373 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AL031595.2-201ENST00000624215 19071 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AP001029.2-203ENST00000589795 4910 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 RNA5SP223-201ENST00000365174 120 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 MTND2P15-201ENST00000418575 892 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 BRWD1P3-201ENST00000428816 390 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 LYPLA1P1-201ENST00000434514 622 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 GAPDHP58-201ENST00000438477 1006 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 MORF4L1P4-201ENST00000450245 976 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AP001804.2-201ENST00000533932 910 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AC011447.4-201ENST00000587562 111 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AC087763.1-201ENST00000603391 286 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 OR4H6P-202ENST00000603819 340 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AC107021.2-201ENST00000567714 2095 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AC092376.2-201ENST00000622621 4116 ntBASIC5.54□□□□□ -1.52
SNX9Q9Y5X1 AC083843.2-201ENST00000568248 6253 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 SNORA48.4-201ENST00000391089 134 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 RCC2P2-201ENST00000422174 918 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 MTND4LP7-201ENST00000431728 294 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC073850.1-201ENST00000449243 255 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC097484.1-201ENST00000471148 389 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 RPL7AP6-201ENST00000477943 801 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC020779.1-201ENST00000478757 796 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC004453.1-201ENST00000487895 408 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 MTND3P24-201ENST00000506306 329 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC117525.1-201ENST00000515228 503 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 RNU6-760P-201ENST00000516078 97 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AL390334.1-201ENST00000556395 450 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 AP005262.1-201ENST00000582646 997 ntBASIC5.53□□□□□ -1.52
SNX9Q9Y5X1 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms