Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF6Q9Y252 MIR4436B2-201ENST00000581415 91 ntBASIC4.84□□□□□ -1.63
RNF6Q9Y252 AC011840.5-201ENST00000582125 771 ntBASIC4.84□□□□□ -1.63
RNF6Q9Y252 MIR4436B1-201ENST00000583272 91 ntBASIC4.84□□□□□ -1.63
RNF6Q9Y252 AC069307.1-201ENST00000602820 447 ntBASIC4.84□□□□□ -1.63
RNF6Q9Y252 AC012213.4-201ENST00000606457 354 ntBASIC4.84□□□□□ -1.63
RNF6Q9Y252 AL049539.1-201ENST00000611964 459 ntBASIC4.84□□□□□ -1.63
RNF6Q9Y252 AC015914.2-201ENST00000618167 288 ntBASIC4.84□□□□□ -1.63
RNF6Q9Y252 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF6Q9Y252 BX005214.3-202ENST00000619809 325 ntBASIC4.84□□□□□ -1.63
RNF6Q9Y252 AP002799.1-201ENST00000623552 423 ntBASIC4.84□□□□□ -1.63
RNF6Q9Y252 CYP4F35P-202ENST00000636121 390 ntBASIC4.84□□□□□ -1.63
RNF6Q9Y252 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF6Q9Y252 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF6Q9Y252 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF6Q9Y252 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF6Q9Y252 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF6Q9Y252 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF6Q9Y252 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF6Q9Y252 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.84□□□□□ -1.64
RNF6Q9Y252 HSPA8P18-201ENST00000439846 1928 ntBASIC4.84□□□□□ -1.64
RNF6Q9Y252 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 MIR589-201ENST00000385238 99 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 AL139128.1-201ENST00000413921 941 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 TRIM60P17-201ENST00000415181 719 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 RBMY2KP-201ENST00000418221 992 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 RFESDP1-201ENST00000422350 461 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 AJ239321.1-201ENST00000424255 564 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 RPL12P17-201ENST00000432393 498 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 RAD1P2-201ENST00000446414 663 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 BTF3P6-201ENST00000448054 499 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 RAB28P3-201ENST00000448325 597 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 AC108161.1-201ENST00000461060 402 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 AL591473.1-201ENST00000464297 313 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 HMGB1P44-201ENST00000508597 572 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 AL390726.5-202ENST00000564800 256 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 OR1F2P-201ENST00000570470 933 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 DPRXP4-201ENST00000578053 568 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 AC022106.2-201ENST00000620114 757 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 AC105105.5-201ENST00000622635 1294 ntBASIC4.83□□□□□ -1.64
RNF6Q9Y252 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF6Q9Y252 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF6Q9Y252 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF6Q9Y252 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF6Q9Y252 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 OR55B1P-203ENST00000641518 2602 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF6Q9Y252 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF6Q9Y252 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF6Q9Y252 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF6Q9Y252 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF6Q9Y252 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 RN7SKP115-201ENST00000363177 317 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 RN7SKP103-201ENST00000363848 320 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 U3.36-201ENST00000408418 213 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 SETP15-201ENST00000412724 337 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 AC093162.1-201ENST00000419682 124 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 AC093655.2-201ENST00000425735 631 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 AC015864.1-201ENST00000496512 544 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 AK4P6-201ENST00000505168 528 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 AC138938.1-201ENST00000515431 782 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF6Q9Y252 AC022784.5-201ENST00000522241 437 ntBASIC4.82□□□□□ -1.64
RNF6Q9Y252 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms