Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
HLA-CQ95604 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.62□□□□□ -1.19
HLA-CQ95604 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.62□□□□□ -1.19
HLA-CQ95604 AP003972.1-201ENST00000625192 5446 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.62□□□□□ -1.19
HLA-CQ95604 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
HLA-CQ95604 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
HLA-CQ95604 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 RNU1-5P-201ENST00000362684 144 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 RNU6-1309P-201ENST00000363305 108 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 RNU6-108P-201ENST00000365558 107 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 SNORA7A-201ENST00000384765 139 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 AL356057.3-201ENST00000402607 340 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.62□□□□□ -1.19
HLA-CQ95604 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.62□□□□□ -1.19
HLA-CQ95604 RBMY2QP-201ENST00000429799 1147 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 RPS3AP54-201ENST00000435535 734 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 Z98949.2-201ENST00000440996 144 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 AC012512.1-201ENST00000446594 718 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 GAPDHP14-201ENST00000450472 937 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 RPL21P71-201ENST00000465598 459 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.62□□□□□ -1.19
HLA-CQ95604 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.62□□□□□ -1.19
HLA-CQ95604 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC7.62□□□□□ -1.19
HLA-CQ95604 IGKV2D-10-201ENST00000520194 281 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 BNIP3P6-201ENST00000549284 499 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.62□□□□□ -1.19
HLA-CQ95604 SCOCP1-201ENST00000554676 349 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
HLA-CQ95604 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.62□□□□□ -1.19
HLA-CQ95604 SNORD39.2-201ENST00000579995 76 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.62□□□□□ -1.19
HLA-CQ95604 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
HLA-CQ95604 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 AL355598.1-201ENST00000604169 202 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 AC011891.2-201ENST00000604949 397 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 AP001521.1-201ENST00000609150 300 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 MRPL57P3-201ENST00000619218 176 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.62□□□□□ -1.19
HLA-CQ95604 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.62□□□□□ -1.19
HLA-CQ95604 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
HLA-CQ95604 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
HLA-CQ95604 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
HLA-CQ95604 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 RIOK3P1-201ENST00000418778 1528 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-CQ95604 AP000766.1-201ENST00000561746 4140 ntBASIC7.62□□□□□ -1.19
HLA-CQ95604 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC7.62□□□□□ -1.19
HLA-CQ95604 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.62□□□□□ -1.19
HLA-CQ95604 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.62□□□□□ -1.19
HLA-CQ95604 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.62□□□□□ -1.19
HLA-CQ95604 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC7.62□□□□□ -1.19
HLA-CQ95604 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 AP001528.3-201ENST00000624364 3249 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
HLA-CQ95604 LRRC37A11P-202ENST00000579258 3717 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
HLA-CQ95604 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
HLA-CQ95604 RPL7P26-201ENST00000333817 754 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 RNU6-1097P-201ENST00000363586 107 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 RNU6-777P-201ENST00000364265 104 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 RNU6-574P-201ENST00000384265 107 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 MIR152-201ENST00000385212 87 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
HLA-CQ95604 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-CQ95604 RPL32P23-201ENST00000397237 405 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 FDPSP5-201ENST00000399474 1057 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.61□□□□□ -1.19
HLA-CQ95604 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.61□□□□□ -1.19
HLA-CQ95604 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-CQ95604 AC245054.2-201ENST00000415639 319 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-CQ95604 AL645937.1-202ENST00000421799 937 ntBASIC7.61□□□□□ -1.19
HLA-CQ95604 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.61□□□□□ -1.19
HLA-CQ95604 AHCYP8-201ENST00000425108 209 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms