Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.13□□□□□ -1.59
CDH6P55285 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH6P55285 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH6P55285 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH6P55285 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
CDH6P55285 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
CDH6P55285 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH6P55285 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CDH6P55285 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH6P55285 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH6P55285 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH6P55285 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH6P55285 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH6P55285 RNU4-44P-201ENST00000363050 141 ntBASIC5.12□□□□□ -1.59
CDH6P55285 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH6P55285 RN7SKP213-201ENST00000410746 298 ntBASIC5.12□□□□□ -1.59
CDH6P55285 GJA6P-201ENST00000415117 1042 ntBASIC5.12□□□□□ -1.59
CDH6P55285 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH6P55285 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH6P55285 AC092162.1-201ENST00000432828 434 ntBASIC5.12□□□□□ -1.59
CDH6P55285 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH6P55285 AL627308.1-201ENST00000435693 821 ntBASIC5.12□□□□□ -1.59
CDH6P55285 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH6P55285 AC002553.2-201ENST00000453217 340 ntBASIC5.12□□□□□ -1.59
CDH6P55285 RN7SL517P-201ENST00000462240 305 ntBASIC5.12□□□□□ -1.59
CDH6P55285 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH6P55285 RN7SL319P-201ENST00000480656 221 ntBASIC5.12□□□□□ -1.59
CDH6P55285 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH6P55285 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH6P55285 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH6P55285 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH6P55285 HMGB3P16-201ENST00000508037 287 ntBASIC5.12□□□□□ -1.59
CDH6P55285 RNA5SP249-201ENST00000516127 99 ntBASIC5.12□□□□□ -1.59
CDH6P55285 AC026688.1-201ENST00000520639 1168 ntBASIC5.12□□□□□ -1.59
CDH6P55285 AC013701.1-201ENST00000522657 465 ntBASIC5.12□□□□□ -1.59
CDH6P55285 BNIP3P1-201ENST00000547295 580 ntBASIC5.12□□□□□ -1.59
CDH6P55285 TVP23CP2-201ENST00000571473 623 ntBASIC5.12□□□□□ -1.59
CDH6P55285 AC022960.2-201ENST00000616300 666 ntBASIC5.12□□□□□ -1.59
CDH6P55285 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH6P55285 BTBD10P1-201ENST00000549824 1352 ntBASIC5.12□□□□□ -1.59
CDH6P55285 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH6P55285 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH6P55285 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH6P55285 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH6P55285 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH6P55285 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH6P55285 AC000374.1-201ENST00000434698 1745 ntBASIC5.11□□□□□ -1.59
CDH6P55285 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH6P55285 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH6P55285 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH6P55285 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH6P55285 RNA5SP305-201ENST00000362665 119 ntBASIC5.11□□□□□ -1.59
CDH6P55285 RNA5SP507-201ENST00000363603 121 ntBASIC5.11□□□□□ -1.59
CDH6P55285 AL078599.1-201ENST00000402075 293 ntBASIC5.11□□□□□ -1.59
CDH6P55285 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.11□□□□□ -1.59
CDH6P55285 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH6P55285 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH6P55285 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH6P55285 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH6P55285 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH6P55285 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH6P55285 AC073850.1-201ENST00000449243 255 ntBASIC5.11□□□□□ -1.59
CDH6P55285 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH6P55285 RPSAP50-201ENST00000481955 852 ntBASIC5.11□□□□□ -1.59
CDH6P55285 AC004815.1-201ENST00000484185 331 ntBASIC5.11□□□□□ -1.59
CDH6P55285 AC093890.1-201ENST00000502554 540 ntBASIC5.11□□□□□ -1.59
CDH6P55285 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH6P55285 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDH6P55285 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH6P55285 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH6P55285 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.11□□□□□ -1.59
CDH6P55285 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH6P55285 HMGN2P6-201ENST00000551091 273 ntBASIC5.11□□□□□ -1.59
CDH6P55285 LSM3P2-201ENST00000551246 273 ntBASIC5.11□□□□□ -1.59
CDH6P55285 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH6P55285 CYCSP40-201ENST00000575927 294 ntBASIC5.11□□□□□ -1.59
CDH6P55285 MEMO1P5-201ENST00000604810 406 ntBASIC5.11□□□□□ -1.59
CDH6P55285 AC087783.2-201ENST00000605070 562 ntBASIC5.11□□□□□ -1.59
CDH6P55285 AP002799.1-201ENST00000623552 423 ntBASIC5.11□□□□□ -1.59
CDH6P55285 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH6P55285 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
CDH6P55285 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH6P55285 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH6P55285 AL022393.1-201ENST00000625142 1677 ntBASIC5.11□□□□□ -1.59
CDH6P55285 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CDH6P55285 AC133552.1-201ENST00000569988 4007 ntBASIC5.11□□□□□ -1.59
CDH6P55285 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH6P55285 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH6P55285 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH6P55285 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH6P55285 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH6P55285 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH6P55285 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CDH6P55285 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH6P55285 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH6P55285 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH6P55285 AL021331.1-201ENST00000402817 582 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms