Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLTCL1P53675 AC020656.2-201ENST00000613291 5309 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.76□□□□□ -1.33
CLTCL1P53675 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.76□□□□□ -1.33
CLTCL1P53675 ADAM5-202ENST00000399789 1942 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 AC021146.4-201ENST00000309229 279 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 SNORA5.1-201ENST00000384275 131 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLTCL1P53675 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.76□□□□□ -1.33
CLTCL1P53675 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.76□□□□□ -1.33
CLTCL1P53675 RPL7AP25-201ENST00000423357 805 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 GTF2IP2-201ENST00000424290 697 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 RPL12P28-201ENST00000430852 489 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 AC092162.1-201ENST00000432828 434 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 AL451139.1-201ENST00000434718 346 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 RPS3AP54-201ENST00000435535 734 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.76□□□□□ -1.33
CLTCL1P53675 MTND2P28-201ENST00000457540 1044 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 OR11I1P-201ENST00000486033 954 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.76□□□□□ -1.33
CLTCL1P53675 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.76□□□□□ -1.33
CLTCL1P53675 RPL23AP53-201ENST00000521854 457 ntBASIC6.76□□□□□ -1.33
CLTCL1P53675 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.76□□□□□ -1.33
CLTCL1P53675 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.76□□□□□ -1.33
CLTCL1P53675 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.76□□□□□ -1.33
CLTCL1P53675 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLTCL1P53675 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.76□□□□□ -1.33
CLTCL1P53675 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
CLTCL1P53675 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CLTCL1P53675 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC6.75□□□□□ -1.33
CLTCL1P53675 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CLTCL1P53675 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CLTCL1P53675 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CLTCL1P53675 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CLTCL1P53675 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CLTCL1P53675 AC120338.1-201ENST00000625074 1541 ntBASIC6.75□□□□□ -1.33
CLTCL1P53675 SAMMSON-210ENST00000641260 1308 ntBASIC6.75□□□□□ -1.33
CLTCL1P53675 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.75□□□□□ -1.33
CLTCL1P53675 AL031119.1-201ENST00000404707 1879 ntBASIC6.75□□□□□ -1.33
CLTCL1P53675 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
CLTCL1P53675 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.75□□□□□ -1.33
CLTCL1P53675 AL136231.1-201ENST00000429407 730 ntBASIC6.75□□□□□ -1.33
CLTCL1P53675 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.75□□□□□ -1.33
CLTCL1P53675 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.75□□□□□ -1.33
CLTCL1P53675 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.75□□□□□ -1.33
CLTCL1P53675 AC020937.1-201ENST00000519677 1013 ntBASIC6.75□□□□□ -1.33
CLTCL1P53675 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.75□□□□□ -1.33
CLTCL1P53675 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.75□□□□□ -1.33
CLTCL1P53675 MIR4660-201ENST00000583549 74 ntBASIC6.75□□□□□ -1.33
CLTCL1P53675 AC073137.1-201ENST00000605636 634 ntBASIC6.75□□□□□ -1.33
CLTCL1P53675 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.75□□□□□ -1.33
CLTCL1P53675 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.75□□□□□ -1.33
CLTCL1P53675 NOL8P1-201ENST00000508336 3529 ntBASIC6.75□□□□□ -1.33
CLTCL1P53675 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CLTCL1P53675 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.75□□□□□ -1.33
CLTCL1P53675 AC091046.3-201ENST00000631455 1574 ntBASIC6.75□□□□□ -1.33
CLTCL1P53675 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CLTCL1P53675 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CLTCL1P53675 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CLTCL1P53675 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.74□□□□□ -1.33
CLTCL1P53675 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CLTCL1P53675 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.74□□□□□ -1.33
CLTCL1P53675 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CLTCL1P53675 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CLTCL1P53675 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CLTCL1P53675 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CLTCL1P53675 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CLTCL1P53675 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.74□□□□□ -1.33
CLTCL1P53675 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.74□□□□□ -1.33
CLTCL1P53675 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.74□□□□□ -1.33
CLTCL1P53675 RPL23AP24-201ENST00000458203 385 ntBASIC6.74□□□□□ -1.33
CLTCL1P53675 RPL21P126-201ENST00000470049 478 ntBASIC6.74□□□□□ -1.33
CLTCL1P53675 RN7SL41P-201ENST00000476144 297 ntBASIC6.74□□□□□ -1.33
CLTCL1P53675 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.74□□□□□ -1.33
CLTCL1P53675 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.74□□□□□ -1.33
CLTCL1P53675 IGKV2D-10-201ENST00000520194 281 ntBASIC6.74□□□□□ -1.33
CLTCL1P53675 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.74□□□□□ -1.33
CLTCL1P53675 TRAV8-5-201ENST00000537369 341 ntBASIC6.74□□□□□ -1.33
CLTCL1P53675 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.74□□□□□ -1.33
CLTCL1P53675 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.74□□□□□ -1.33
CLTCL1P53675 PARP1P2-201ENST00000556806 195 ntBASIC6.74□□□□□ -1.33
CLTCL1P53675 AC023575.1-201ENST00000580510 358 ntBASIC6.74□□□□□ -1.33
CLTCL1P53675 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.74□□□□□ -1.33
CLTCL1P53675 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CLTCL1P53675 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CLTCL1P53675 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CLTCL1P53675 AP000432.2-201ENST00000624164 2048 ntBASIC6.74□□□□□ -1.33
CLTCL1P53675 AC009951.1-201ENST00000623674 2614 ntBASIC6.74□□□□□ -1.33
CLTCL1P53675 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CLTCL1P53675 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CLTCL1P53675 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
CLTCL1P53675 STX3-208ENST00000641815 3236 ntBASIC6.73□□□□□ -1.33
CLTCL1P53675 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CLTCL1P53675 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLTCL1P53675 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLTCL1P53675 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CLTCL1P53675 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CLTCL1P53675 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLTCL1P53675 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CLTCL1P53675 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms