Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.56□□□□□ -1.52
MMP13P45452 AP003355.1-201ENST00000518956 587 ntBASIC5.56□□□□□ -1.52
MMP13P45452 NPM1P35-201ENST00000533043 868 ntBASIC5.56□□□□□ -1.52
MMP13P45452 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.56□□□□□ -1.52
MMP13P45452 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.56□□□□□ -1.52
MMP13P45452 AC090666.1-201ENST00000578241 445 ntBASIC5.56□□□□□ -1.52
MMP13P45452 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MMP13P45452 AL583832.1-201ENST00000603227 784 ntBASIC5.56□□□□□ -1.52
MMP13P45452 AL589674.2-201ENST00000604304 337 ntBASIC5.56□□□□□ -1.52
MMP13P45452 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.56□□□□□ -1.52
MMP13P45452 AC004943.3-201ENST00000624116 600 ntBASIC5.56□□□□□ -1.52
MMP13P45452 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.56□□□□□ -1.52
MMP13P45452 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MMP13P45452 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MMP13P45452 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
MMP13P45452 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP13P45452 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.56□□□□□ -1.52
MMP13P45452 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP13P45452 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP13P45452 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.56□□□□□ -1.52
MMP13P45452 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MMP13P45452 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.56□□□□□ -1.52
MMP13P45452 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MMP13P45452 AC005261.6-201ENST00000623072 1387 ntBASIC5.55□□□□□ -1.52
MMP13P45452 CASC19-248ENST00000641674 1356 ntBASIC5.55□□□□□ -1.52
MMP13P45452 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AL022311.1-201ENST00000623726 19416 ntBASIC5.55□□□□□ -1.52
MMP13P45452 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MMP13P45452 RNA5SP435-201ENST00000364044 108 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.55□□□□□ -1.52
MMP13P45452 MTCO2P21-201ENST00000419780 677 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AJ239321.1-201ENST00000424255 564 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP13P45452 VN1R108P-201ENST00000431580 830 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.55□□□□□ -1.52
MMP13P45452 RPL12P18-201ENST00000437175 325 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AL391987.1-201ENST00000441025 200 ntBASIC5.55□□□□□ -1.52
MMP13P45452 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.55□□□□□ -1.52
MMP13P45452 XKRY2-201ENST00000442362 1093 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AL161722.1-201ENST00000446972 1032 ntBASIC5.55□□□□□ -1.52
MMP13P45452 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.55□□□□□ -1.52
MMP13P45452 C1DP3-201ENST00000455013 423 ntBASIC5.55□□□□□ -1.52
MMP13P45452 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP13P45452 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP13P45452 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.55□□□□□ -1.52
MMP13P45452 RPL35AP19-201ENST00000469425 329 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC100832.1-201ENST00000471945 383 ntBASIC5.55□□□□□ -1.52
MMP13P45452 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MMP13P45452 RN7SL174P-201ENST00000475578 289 ntBASIC5.55□□□□□ -1.52
MMP13P45452 RN7SL423P-201ENST00000486202 304 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP13P45452 AC109464.1-201ENST00000511091 819 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.55□□□□□ -1.52
MMP13P45452 RFPL4AP3-201ENST00000515267 345 ntBASIC5.55□□□□□ -1.52
MMP13P45452 SCARNA16.4-201ENST00000516956 187 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.55□□□□□ -1.52
MMP13P45452 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 AP006245.2-201ENST00000522004 300 ntBASIC5.55□□□□□ -1.52
MMP13P45452 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 AC021451.1-201ENST00000523498 1129 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP13P45452 MTATP6P15-201ENST00000527233 835 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MMP13P45452 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 OR11H3P-201ENST00000554547 982 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC127381.1-201ENST00000555979 939 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.55□□□□□ -1.52
MMP13P45452 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 AC012146.2-201ENST00000576545 416 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP13P45452 MIR3936-201ENST00000584304 110 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.55□□□□□ -1.52
MMP13P45452 AP000769.2-201ENST00000602344 396 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AL022161.1-201ENST00000604390 213 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC010245.2-201ENST00000606908 1167 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC018926.1-201ENST00000616335 435 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC074276.2-201ENST00000619891 348 ntBASIC5.55□□□□□ -1.52
MMP13P45452 MIR8080-201ENST00000622224 89 ntBASIC5.55□□□□□ -1.52
MMP13P45452 AC135068.5-201ENST00000624197 983 ntBASIC5.55□□□□□ -1.52
MMP13P45452 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
MMP13P45452 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.55□□□□□ -1.52
MMP13P45452 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MMP13P45452 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP13P45452 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
MMP13P45452 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MMP13P45452 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MMP13P45452 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.55□□□□□ -1.52
MMP13P45452 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MMP13P45452 AL138820.1-201ENST00000617901 5305 ntBASIC5.54□□□□□ -1.52
MMP13P45452 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.54□□□□□ -1.52
MMP13P45452 MRRFP1-201ENST00000435941 1675 ntBASIC5.54□□□□□ -1.52
MMP13P45452 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MMP13P45452 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms