Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.44□□□□□ -1.38
COL15A1P39059 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.44□□□□□ -1.38
COL15A1P39059 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.44□□□□□ -1.38
COL15A1P39059 AC005377.1-201ENST00000605126 456 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC083809.1-201ENST00000615051 472 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC026367.3-201ENST00000619032 590 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 MIR6758-201ENST00000620653 63 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AP001002.2-201ENST00000625137 386 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.44□□□□□ -1.38
COL15A1P39059 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.44□□□□□ -1.38
COL15A1P39059 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.44□□□□□ -1.38
COL15A1P39059 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.44□□□□□ -1.38
COL15A1P39059 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.44□□□□□ -1.38
COL15A1P39059 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.44□□□□□ -1.38
COL15A1P39059 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COL15A1P39059 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COL15A1P39059 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COL15A1P39059 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 RNU6-1176P-201ENST00000390955 107 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.44□□□□□ -1.38
COL15A1P39059 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.44□□□□□ -1.38
COL15A1P39059 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.44□□□□□ -1.38
COL15A1P39059 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 TCEA1P1-201ENST00000449716 880 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 MTND5P8-201ENST00000449817 1083 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC016559.2-201ENST00000510759 359 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.44□□□□□ -1.38
COL15A1P39059 MORF4L1P3-201ENST00000525966 950 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.44□□□□□ -1.38
COL15A1P39059 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 MTND2P17-201ENST00000550281 688 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.44□□□□□ -1.38
COL15A1P39059 AL512310.9-201ENST00000553311 948 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.44□□□□□ -1.38
COL15A1P39059 AC040958.1-201ENST00000561102 201 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 EIF1P5-201ENST00000585002 234 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 DNAJC19P3-201ENST00000594491 331 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.44□□□□□ -1.38
COL15A1P39059 AC012414.7-202ENST00000622705 1090 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC006453.5-201ENST00000636451 619 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
COL15A1P39059 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL15A1P39059 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL15A1P39059 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.43□□□□□ -1.38
COL15A1P39059 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL15A1P39059 SAMMSON-226ENST00000642089 1582 ntBASIC6.43□□□□□ -1.38
COL15A1P39059 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.43□□□□□ -1.38
COL15A1P39059 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL15A1P39059 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
COL15A1P39059 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
COL15A1P39059 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL15A1P39059 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL15A1P39059 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.43□□□□□ -1.38
COL15A1P39059 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.43□□□□□ -1.38
COL15A1P39059 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.43□□□□□ -1.38
COL15A1P39059 RNA5SP332-201ENST00000391063 115 ntBASIC6.43□□□□□ -1.38
COL15A1P39059 SNORA77-201ENST00000408716 125 ntBASIC6.43□□□□□ -1.38
COL15A1P39059 AF186996.5-201ENST00000418098 904 ntBASIC6.43□□□□□ -1.38
COL15A1P39059 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.43□□□□□ -1.38
COL15A1P39059 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.43□□□□□ -1.38
COL15A1P39059 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.43□□□□□ -1.38
COL15A1P39059 UBE2V1P6-201ENST00000430840 422 ntBASIC6.43□□□□□ -1.38
COL15A1P39059 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.43□□□□□ -1.38
COL15A1P39059 RN7SL385P-201ENST00000468873 276 ntBASIC6.43□□□□□ -1.38
COL15A1P39059 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.43□□□□□ -1.38
COL15A1P39059 HPRT1P1-201ENST00000509498 657 ntBASIC6.43□□□□□ -1.38
COL15A1P39059 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.43□□□□□ -1.38
COL15A1P39059 AC092709.1-201ENST00000521355 1045 ntBASIC6.43□□□□□ -1.38
COL15A1P39059 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.43□□□□□ -1.38
COL15A1P39059 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.43□□□□□ -1.38
COL15A1P39059 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.43□□□□□ -1.38
COL15A1P39059 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.43□□□□□ -1.38
COL15A1P39059 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL15A1P39059 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.43□□□□□ -1.38
COL15A1P39059 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.43□□□□□ -1.38
COL15A1P39059 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.43□□□□□ -1.38
COL15A1P39059 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL15A1P39059 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL15A1P39059 AC109446.4-201ENST00000623235 2755 ntBASIC6.42□□□□□ -1.38
COL15A1P39059 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
COL15A1P39059 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL15A1P39059 AL513548.1-201ENST00000562904 1724 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms