Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 LINC00993-201ENST00000420453 540 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 RPS26P2-201ENST00000440331 348 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AC234781.3-201ENST00000452540 973 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 snoU13.20-201ENST00000459180 104 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AC005532.2-201ENST00000467154 373 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 RPL23AP37-201ENST00000479658 549 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 MORF4L1P3-201ENST00000525966 950 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AC079075.1-201ENST00000559543 878 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AC020910.3-201ENST00000603701 874 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AC011453.2-201ENST00000603737 729 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AL139407.1-201ENST00000613826 1175 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 MTCO1P11-201ENST00000429111 1528 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 LINC01355-201ENST00000566551 5444 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 SMG1P6-201ENST00000532337 2930 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AL121950.1-201ENST00000624993 2077 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 RNU4-4P-201ENST00000364588 130 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 SNORD96B-201ENST00000386148 79 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 EI24P3-201ENST00000399046 1062 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 RPL7P57-201ENST00000423238 740 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 FABP7P1-201ENST00000424004 391 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 Z80107.2-201ENST00000445127 392 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 SLC25A18P1-201ENST00000449385 454 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 RPS4XP12-201ENST00000461747 709 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AC109462.1-201ENST00000491087 368 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 BTG4P1-201ENST00000510421 183 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AC133555.2-201ENST00000550213 292 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AC097505.1-201ENST00000610199 565 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AC007497.1-201ENST00000610421 561 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AL121612.2-201ENST00000612261 482 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AL359757.1-201ENST00000623176 255 ntBASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TRAV27A0A087WT01 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 RN7SKP95-201ENST00000362860 303 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 RNU1-82P-201ENST00000390851 165 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 U3.30-201ENST00000391308 210 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 CHEK2P3-201ENST00000416118 248 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC093162.1-201ENST00000419682 124 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC012519.1-201ENST00000424588 610 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 EEF1B2P5-201ENST00000444820 548 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC010733.1-201ENST00000451515 401 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC117394.1-201ENST00000477323 567 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC006499.3-201ENST00000506077 748 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms