Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL390728.3-201ENST00000452704 270 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AL513533.1-201ENST00000453728 415 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC013429.1-201ENST00000456604 422 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL7AP56-201ENST00000476420 791 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL7P6-201ENST00000480903 738 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 Z99943.2-201ENST00000507585 266 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AP003072.1-201ENST00000531740 145 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 RN7SL25P-201ENST00000583862 260 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC009955.2-201ENST00000597288 542 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AP001521.1-201ENST00000609150 300 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC002550.2-201ENST00000621246 394 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AL645937.1-201ENST00000641739 1652 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 SAMMSON-203ENST00000641005 2168 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AL161912.4-201ENST00000623889 2468 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC090220.1-201ENST00000593078 1699 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RNA5SP218-201ENST00000363188 109 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RNU6-251P-201ENST00000363235 104 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RNY3P3-201ENST00000363816 102 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RNA5SP260-201ENST00000363849 111 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RNU6-1151P-201ENST00000384684 107 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RNU6-332P-201ENST00000391193 108 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 OR2W4P-201ENST00000406496 926 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RNU6-908P-201ENST00000410160 94 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AL355862.1-201ENST00000412705 353 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RAD23BP1-201ENST00000421404 1227 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 SAR1AP4-201ENST00000429225 591 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC009299.1-201ENST00000429684 717 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL31P35-201ENST00000431058 377 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL7P54-201ENST00000438336 674 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 HMGB3P9-201ENST00000441799 583 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL17P49-201ENST00000443728 411 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RN7SL58P-201ENST00000473445 294 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RN7SL516P-201ENST00000496127 297 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 BRD9P1-201ENST00000529855 560 ntBASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms