Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 RPS3AP17-201ENST00000472594 777 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 AC079841.1-201ENST00000481228 950 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 AC073522.1-201ENST00000483312 377 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 RPS4XP15-201ENST00000489210 795 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 RPL7P24-201ENST00000493052 752 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 AC063943.2-201ENST00000495697 534 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 AL358832.1-201ENST00000497800 389 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 AC023818.1-201ENST00000498379 384 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 AC106822.1-201ENST00000502647 526 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 AC093816.1-201ENST00000515076 913 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 AC026898.1-201ENST00000586404 571 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 DUXAP9-208ENST00000622815 614 ntBASIC7.07□□□□□ -1.28
CNTN3Q9P232 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CNTN3Q9P232 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CNTN3Q9P232 MTCO1P23-201ENST00000415223 1526 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTN3Q9P232 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CNTN3Q9P232 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CNTN3Q9P232 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTN3Q9P232 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTN3Q9P232 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 RPL11P4-201ENST00000332269 436 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 Y_RNA.813-201ENST00000364639 102 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 RNU6-1011P-201ENST00000384668 107 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 AC245036.1-201ENST00000391727 309 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 FGF7P8-201ENST00000402994 292 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 CIR1P3-201ENST00000405137 479 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 RNU6-77P-201ENST00000410554 91 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 AL590806.1-201ENST00000415818 853 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 HMGB1P45-201ENST00000435986 653 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 TRIM60P16-201ENST00000444048 694 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 OR13K1P-201ENST00000444577 975 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 AC097359.1-201ENST00000447946 463 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 EPS15P1-201ENST00000448836 336 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 AC098824.1-201ENST00000453565 980 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 RN7SL39P-201ENST00000462264 297 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 AC023424.2-201ENST00000493479 777 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 SNORA74.1-201ENST00000516320 180 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 IGHV3-57-201ENST00000520143 280 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 OR5AK1P-201ENST00000524837 922 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTN3Q9P232 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 AL135999.3-201ENST00000610501 812 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 AL596275.2-208ENST00000641192 594 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTN3Q9P232 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTN3Q9P232 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 ZNF733P-202ENST00000444809 1573 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTN3Q9P232 PARP4P1-201ENST00000435945 2337 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 PPBPP2-201ENST00000513150 1362 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNTN3Q9P232 CR383658.2-201ENST00000547576 1525 ntBASIC7.06□□□□□ -1.28
CNTN3Q9P232 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.06□□□□□ -1.28
CNTN3Q9P232 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms