Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 PAH-201ENST00000307000 2466 ntTSL 5 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 AC073365.1-203ENST00000641055 1992 ntBASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 AC090132.1-201ENST00000524071 1480 ntBASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 AL391261.1-201ENST00000555712 1479 ntBASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 TSNAX-201ENST00000366639 2650 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 AL591543.1-202ENST00000642095 4149 ntBASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 EEF1A1P16-201ENST00000325349 1414 ntBASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRTAP4-3Q9BYR4 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 AL442128.2-201ENST00000620246 1824 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 AL034370.1-201ENST00000397254 1590 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 TTC3P1-201ENST00000399586 6081 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 NLRP9P1-201ENST00000540920 2655 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 OR52B1P-201ENST00000316506 909 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 GAPDHP24-201ENST00000328713 983 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 Y_RNA.20-201ENST00000362479 113 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 Y_RNA.80-201ENST00000362996 102 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 RNU6-819P-201ENST00000364116 107 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 RNA5SP238-201ENST00000365464 120 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 RNU6-338P-201ENST00000383888 105 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 Y_RNA.483-201ENST00000384380 101 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 RNU6-713P-201ENST00000384761 107 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 SNORA12.1-201ENST00000390873 148 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 RNU6-1093P-201ENST00000391194 107 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 Y_RNA.645-201ENST00000391229 102 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms