Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC121758.1-202ENST00000556917 658 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 RSL24D1P11-201ENST00000591045 491 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC020914.6-201ENST00000594327 272 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC245052.7-201ENST00000601161 359 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 LSM1P2-201ENST00000604911 322 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC106028.5-201ENST00000610332 395 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC243773.3-201ENST00000613270 256 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 U1.25-201ENST00000614085 162 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AL356266.1-201ENST00000623311 483 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 SLC2A3P1-201ENST00000519666 1451 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC005332.9-201ENST00000620266 2921 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 PPBPP2-201ENST00000513150 1362 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 U3.4-201ENST00000363352 213 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 RNU6-374P-201ENST00000364146 108 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 RN7SKP187-201ENST00000365536 330 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 U3.23-201ENST00000391132 200 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 CYCSP17-201ENST00000407870 315 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 LINC00328-2P-201ENST00000436585 219 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 ARMC4P1-201ENST00000438905 707 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AL138878.2-201ENST00000440581 1241 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AL831737.1-201ENST00000441288 271 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 PFN1P11-201ENST00000445829 389 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 EEF1A1P1-201ENST00000447052 739 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 RN7SL168P-201ENST00000463821 279 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 FAM172BP-201ENST00000487497 1089 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 RPS4XP15-201ENST00000489210 795 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 MTCYBP17-201ENST00000503579 789 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AP003033.1-201ENST00000527244 415 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 OR4A12P-201ENST00000530847 918 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 EIF5A2P1-201ENST00000564027 460 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC087575.1-201ENST00000585087 229 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AL353600.1-201ENST00000608148 251 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC103591.3-201ENST00000608684 209 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AP001521.1-201ENST00000609150 300 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AP000254.1-201ENST00000609934 520 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC013562.2-201ENST00000611632 603 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC092656.1-203ENST00000624134 423 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 Z97989.1-201ENST00000531702 2421 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 MAPK10-344ENST00000641718 3746 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 AC074141.1-201ENST00000588129 2995 ntBASIC7.34□□□□□ -1.23
TRAIPQ9BWF2 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
TRAIPQ9BWF2 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
TRAIPQ9BWF2 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.34□□□□□ -1.24
TRAIPQ9BWF2 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.34□□□□□ -1.24
TRAIPQ9BWF2 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
TRAIPQ9BWF2 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.34□□□□□ -1.24
TRAIPQ9BWF2 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRAIPQ9BWF2 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRAIPQ9BWF2 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRAIPQ9BWF2 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms