Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 CASC19-260ENST00000641828 2001 ntBASIC5.92□□□□□ -1.46
SNED1Q8TER0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AC008758.3-201ENST00000507003 1829 ntBASIC5.92□□□□□ -1.46
SNED1Q8TER0 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AC068446.1-201ENST00000556425 1549 ntBASIC5.92□□□□□ -1.46
SNED1Q8TER0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AC139426.3-201ENST00000605648 2059 ntBASIC5.92□□□□□ -1.46
SNED1Q8TER0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 ST13P16-201ENST00000401760 781 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 AL035079.1-201ENST00000405210 287 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC010618.1-201ENST00000469924 477 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC084824.1-201ENST00000550917 1005 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC040958.1-201ENST00000561102 201 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 MRPS21P9-201ENST00000571150 257 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC023575.1-201ENST00000580510 358 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC100847.1-201ENST00000611316 481 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNED1Q8TER0 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNED1Q8TER0 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNED1Q8TER0 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AP000641.1-201ENST00000531988 1639 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNED1Q8TER0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNED1Q8TER0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AP000756.2-201ENST00000624168 2567 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 UQCRBP1-201ENST00000421129 336 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 COX6CP13-201ENST00000428703 226 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC122718.1-201ENST00000439448 744 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC239367.2-201ENST00000447309 705 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC108463.1-201ENST00000450258 347 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 Z95152.1-201ENST00000453556 656 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 FAM133DP-201ENST00000464802 691 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC091868.1-201ENST00000508746 304 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC138701.1-201ENST00000524329 714 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 CYCSP29-201ENST00000533731 318 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.91□□□□□ -1.46
SNED1Q8TER0 AC019206.1-201ENST00000621938 425 ntBASIC5.91□□□□□ -1.46
SNED1Q8TER0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SNED1Q8TER0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SNED1Q8TER0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.9□□□□□ -1.46
SNED1Q8TER0 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.9□□□□□ -1.46
SNED1Q8TER0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.9□□□□□ -1.46
SNED1Q8TER0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SNED1Q8TER0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 AC092451.3-201ENST00000625067 1343 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SNED1Q8TER0 RNA5SP388-201ENST00000362584 119 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 RNA5SP28-201ENST00000363841 119 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 RN7SKP227-201ENST00000364445 330 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SNED1Q8TER0 RPL17P36-201ENST00000420302 549 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 LINC00993-201ENST00000420453 540 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 YWHAZP2-201ENST00000440317 728 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 AC108751.3-201ENST00000461814 1020 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 AC016559.2-201ENST00000510759 359 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 AC116553.2-201ENST00000564203 463 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 AC092653.1-201ENST00000608509 531 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms