Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC139769.3-201ENST00000618383 175 ntBASIC4.55□□□□□ -1.68
CDX1P47902 AC006249.1-201ENST00000621223 471 ntBASIC4.55□□□□□ -1.68
CDX1P47902 AC095038.2-201ENST00000621464 1070 ntBASIC4.55□□□□□ -1.68
CDX1P47902 AC015726.3-201ENST00000624501 418 ntBASIC4.55□□□□□ -1.68
CDX1P47902 MIR4302-201ENST00000638058 60 ntBASIC4.55□□□□□ -1.68
CDX1P47902 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CDX1P47902 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDX1P47902 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDX1P47902 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDX1P47902 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDX1P47902 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.55□□□□□ -1.68
CDX1P47902 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.55□□□□□ -1.68
CDX1P47902 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.55□□□□□ -1.68
CDX1P47902 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.55□□□□□ -1.68
CDX1P47902 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDX1P47902 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.55□□□□□ -1.68
CDX1P47902 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDX1P47902 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
CDX1P47902 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.55□□□□□ -1.68
CDX1P47902 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDX1P47902 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 CASC19-221ENST00000641309 1382 ntBASIC4.54□□□□□ -1.68
CDX1P47902 OR13C1P-202ENST00000641378 2919 ntBASIC4.54□□□□□ -1.68
CDX1P47902 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDX1P47902 IGKV7-3-201ENST00000357453 298 ntBASIC4.54□□□□□ -1.68
CDX1P47902 RNA5SP500-201ENST00000364486 119 ntBASIC4.54□□□□□ -1.68
CDX1P47902 RN7SKP78-201ENST00000364711 318 ntBASIC4.54□□□□□ -1.68
CDX1P47902 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CDX1P47902 AC233289.1-201ENST00000403700 508 ntBASIC4.54□□□□□ -1.68
CDX1P47902 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.54□□□□□ -1.68
CDX1P47902 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.54□□□□□ -1.68
CDX1P47902 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.54□□□□□ -1.68
CDX1P47902 PNRC2P1-201ENST00000423940 420 ntBASIC4.54□□□□□ -1.68
CDX1P47902 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.54□□□□□ -1.68
CDX1P47902 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.54□□□□□ -1.68
CDX1P47902 AL161636.2-201ENST00000445179 927 ntBASIC4.54□□□□□ -1.68
CDX1P47902 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.54□□□□□ -1.68
CDX1P47902 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.54□□□□□ -1.68
CDX1P47902 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.54□□□□□ -1.68
CDX1P47902 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.54□□□□□ -1.68
CDX1P47902 RN7SKP288-201ENST00000516227 268 ntBASIC4.54□□□□□ -1.68
CDX1P47902 AP006245.2-201ENST00000522004 300 ntBASIC4.54□□□□□ -1.68
CDX1P47902 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDX1P47902 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.54□□□□□ -1.68
CDX1P47902 AC007346.2-201ENST00000564816 892 ntBASIC4.54□□□□□ -1.68
CDX1P47902 GARSP1-201ENST00000570895 719 ntBASIC4.54□□□□□ -1.68
CDX1P47902 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 TMF1P1-201ENST00000576058 373 ntBASIC4.54□□□□□ -1.68
CDX1P47902 DHFRP1-201ENST00000579682 559 ntBASIC4.54□□□□□ -1.68
CDX1P47902 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 PSMA6P4-201ENST00000603247 718 ntBASIC4.54□□□□□ -1.68
CDX1P47902 AC096553.1-201ENST00000605169 829 ntBASIC4.54□□□□□ -1.68
CDX1P47902 AC120053.1-201ENST00000607706 736 ntBASIC4.54□□□□□ -1.68
CDX1P47902 AC016957.2-201ENST00000616998 848 ntBASIC4.54□□□□□ -1.68
CDX1P47902 AC126175.1-201ENST00000617041 758 ntBASIC4.54□□□□□ -1.68
CDX1P47902 AL355974.3-201ENST00000617383 467 ntBASIC4.54□□□□□ -1.68
CDX1P47902 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 AP002371.2-201ENST00000624450 503 ntBASIC4.54□□□□□ -1.68
CDX1P47902 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.54□□□□□ -1.68
CDX1P47902 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CDX1P47902 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.54□□□□□ -1.68
CDX1P47902 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CDX1P47902 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.54□□□□□ -1.68
CDX1P47902 AC130304.1-201ENST00000622942 2385 ntBASIC4.54□□□□□ -1.68
CDX1P47902 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDX1P47902 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.53□□□□□ -1.68
CDX1P47902 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.53□□□□□ -1.68
CDX1P47902 MAPK10-349ENST00000641767 3661 ntBASIC4.53□□□□□ -1.68
CDX1P47902 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDX1P47902 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDX1P47902 AC008079.2-201ENST00000623543 20396 ntBASIC4.53□□□□□ -1.68
CDX1P47902 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDX1P47902 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.53□□□□□ -1.68
CDX1P47902 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CDX1P47902 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDX1P47902 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.53□□□□□ -1.68
CDX1P47902 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms