Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RSU1P3-201ENST00000412878 835 ntBASIC5.72□□□□□ -1.49
NEDD4P46934 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.72□□□□□ -1.49
NEDD4P46934 NFYAP1-201ENST00000431953 972 ntBASIC5.72□□□□□ -1.49
NEDD4P46934 RPL36AP15-201ENST00000444514 266 ntBASIC5.72□□□□□ -1.49
NEDD4P46934 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.72□□□□□ -1.49
NEDD4P46934 AL356390.1-201ENST00000455684 397 ntBASIC5.72□□□□□ -1.49
NEDD4P46934 RN7SL558P-201ENST00000497468 299 ntBASIC5.72□□□□□ -1.49
NEDD4P46934 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD4P46934 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.72□□□□□ -1.49
NEDD4P46934 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.72□□□□□ -1.49
NEDD4P46934 AP001880.2-201ENST00000538233 448 ntBASIC5.72□□□□□ -1.49
NEDD4P46934 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
NEDD4P46934 MIR3667-201ENST00000581025 74 ntBASIC5.72□□□□□ -1.49
NEDD4P46934 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.72□□□□□ -1.49
NEDD4P46934 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.72□□□□□ -1.49
NEDD4P46934 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
NEDD4P46934 STX3-208ENST00000641815 3236 ntBASIC5.71□□□□□ -1.49
NEDD4P46934 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NEDD4P46934 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD4P46934 SOCS5P3-201ENST00000425115 1576 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 AL138820.1-201ENST00000617901 5305 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD4P46934 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD4P46934 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD4P46934 RNU6-316P-201ENST00000391027 107 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NEDD4P46934 RN7SKP100-201ENST00000411258 284 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD4P46934 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD4P46934 AC244033.1-201ENST00000426826 870 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 RPS27P18-201ENST00000431701 247 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 AC092162.1-201ENST00000432828 434 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.71□□□□□ -1.5
NEDD4P46934 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD4P46934 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.71□□□□□ -1.5
NEDD4P46934 AC091685.2-201ENST00000454924 864 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.71□□□□□ -1.5
NEDD4P46934 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.71□□□□□ -1.5
NEDD4P46934 RNU6-709P-201ENST00000517257 104 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 AC021733.2-201ENST00000518830 497 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD4P46934 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.71□□□□□ -1.5
NEDD4P46934 RN7SL802P-201ENST00000577858 299 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 MIR4480-201ENST00000582492 71 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 MIR6730-201ENST00000622213 67 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 AC243960.7-201ENST00000623532 707 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.71□□□□□ -1.5
NEDD4P46934 AC138627.1-204ENST00000641894 765 ntBASIC5.71□□□□□ -1.5
NEDD4P46934 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NEDD4P46934 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD4P46934 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD4P46934 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD4P46934 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.7□□□□□ -1.5
NEDD4P46934 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NEDD4P46934 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.7□□□□□ -1.5
NEDD4P46934 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD4P46934 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.7□□□□□ -1.5
NEDD4P46934 NCLP2-201ENST00000416078 1462 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD4P46934 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NEDD4P46934 MIR937-201ENST00000401271 86 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 RGS17P1-201ENST00000423358 553 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 OR2AH1P-201ENST00000425717 928 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 GTF3AP5-201ENST00000442645 697 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.7□□□□□ -1.5
NEDD4P46934 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.7□□□□□ -1.5
NEDD4P46934 SBDSP1-204ENST00000453858 737 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.7□□□□□ -1.5
NEDD4P46934 SCARNA22-201ENST00000503991 125 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.7□□□□□ -1.5
NEDD4P46934 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.7□□□□□ -1.5
NEDD4P46934 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.7□□□□□ -1.5
NEDD4P46934 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.7□□□□□ -1.5
NEDD4P46934 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.7□□□□□ -1.5
NEDD4P46934 EDDM3DP-201ENST00000554692 434 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.7□□□□□ -1.5
NEDD4P46934 AP000919.1-201ENST00000582850 985 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 AC022726.1-201ENST00000587475 207 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 AC005084.1-201ENST00000605160 304 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.7□□□□□ -1.5
NEDD4P46934 SMG1P6-201ENST00000532337 2930 ntBASIC5.7□□□□□ -1.5
NEDD4P46934 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD4P46934 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD4P46934 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.69□□□□□ -1.5
NEDD4P46934 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD4P46934 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.69□□□□□ -1.5
NEDD4P46934 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NEDD4P46934 TLK1P1-201ENST00000456760 2440 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD4P46934 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD4P46934 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD4P46934 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD4P46934 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NEDD4P46934 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD4P46934 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD4P46934 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NEDD4P46934 AC103591.2-201ENST00000265259 766 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 AC016769.2-201ENST00000414815 475 ntBASIC5.69□□□□□ -1.5
NEDD4P46934 LINC00993-201ENST00000420453 540 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms