Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AC095031.1-201ENST00000623685 672 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AL691477.1-201ENST00000624398 162 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AC019226.1-201ENST00000625666 515 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 ASNSP1-204ENST00000641977 1664 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 AF287957.1-201ENST00000607368 1595 ntBASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TMEM88BA6NKF7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AL355488.2-201ENST00000609909 2850 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AL136984.1-201ENST00000607611 1893 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 CDY7P-201ENST00000429883 1604 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 XRCC6P5-201ENST00000435236 1795 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 RNU1-150P-201ENST00000362491 162 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 RNU6-492P-201ENST00000363035 104 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 EI24P3-201ENST00000399046 1062 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AL512430.2-201ENST00000406786 339 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 LINC00993-201ENST00000420453 540 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 EIF1P1-201ENST00000421436 341 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC093698.1-201ENST00000423843 571 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 TCEA1P3-201ENST00000443005 880 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 COX6CP12-201ENST00000446748 202 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AL603882.1-201ENST00000463059 681 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 SIAH1P1-201ENST00000479411 923 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 RPL7P6-201ENST00000480903 738 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 RPS4XP15-201ENST00000489210 795 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 HMGB1P44-201ENST00000508597 572 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 IMPA1P1-201ENST00000510718 842 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 CYCSP22-201ENST00000517555 339 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AL139174.1-201ENST00000531489 886 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC009237.13-201ENST00000603193 276 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC067959.1-201ENST00000604334 379 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC079395.2-201ENST00000610982 737 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC024941.1-201ENST00000612250 334 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 AC073488.2-201ENST00000631903 751 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 ATE1-AS1-202ENST00000636460 506 ntBASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms