Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 IFIT1P1-201ENST00000400497 1449 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 Y_RNA.25-201ENST00000362528 102 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 SNORA70H-201ENST00000383910 135 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 SNORA70J-201ENST00000384182 135 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 SNORD116-23-201ENST00000384645 92 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 MIR152-201ENST00000385212 87 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 HNRNPCP2-201ENST00000399515 881 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 NACAP7-201ENST00000407371 609 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AL596448.1-201ENST00000415024 392 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC083875.1-201ENST00000419509 405 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AL953862.1-201ENST00000423016 168 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 RPL26P28-201ENST00000451325 435 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC074386.1-201ENST00000476560 767 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 RN7SL382P-201ENST00000482631 282 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 NPM1P27-201ENST00000502784 830 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 MTCO2P30-201ENST00000503662 364 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC021678.1-201ENST00000505195 936 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 NDUFB4P2-201ENST00000509515 391 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 IGKV2D-10-201ENST00000520194 281 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 IGLVV-66-201ENST00000523818 341 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 OR52K3P-201ENST00000531655 943 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC137800.2-201ENST00000574375 120 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC113361.1-201ENST00000606683 543 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC055764.2-201ENST00000610089 670 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 MIR6726-201ENST00000613751 61 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC008250.2-201ENST00000615261 205 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC018926.3-201ENST00000618841 406 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AP005212.3-201ENST00000619964 528 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 OR7E161P-202ENST00000641994 1033 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AC068769.1-201ENST00000474767 2426 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 AL034370.1-201ENST00000397254 1590 ntBASIC5.91□□□□□ -1.46
SHISA3A0PJX4 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHISA3A0PJX4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 ZNF680P1-201ENST00000436625 1469 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 OR4K15-201ENST00000305051 1216 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 Y_RNA.97-201ENST00000363094 102 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms