Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 RPS10P21-201ENST00000430654 475 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 ARL2BPP10-201ENST00000446487 531 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PHOX2BQ99453 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 AL356010.1-201ENST00000456364 102 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 APOOP2-201ENST00000461561 539 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 RN7SL19P-201ENST00000462522 306 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 RN7SL36P-201ENST00000469345 276 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 AC010301.1-201ENST00000473936 355 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 AC108693.1-201ENST00000496068 432 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 EIF4EP3-201ENST00000498782 656 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 RNU6-488P-201ENST00000515918 99 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 IGKV2-36-201ENST00000519999 223 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 SNX18P27-201ENST00000523611 779 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 OR5AH1P-201ENST00000595968 283 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 VN1R107P-201ENST00000601784 209 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 AL136097.3-201ENST00000611097 505 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PHOX2BQ99453 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
PHOX2BQ99453 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 AL133279.3-201ENST00000563140 2352 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
PHOX2BQ99453 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
PHOX2BQ99453 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PHOX2BQ99453 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 AC114324.1-201ENST00000504077 3152 ntBASIC7.79□□□□□ -1.16
PHOX2BQ99453 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.79□□□□□ -1.16
PHOX2BQ99453 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PHOX2BQ99453 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
PHOX2BQ99453 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
PHOX2BQ99453 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHOX2BQ99453 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHOX2BQ99453 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHOX2BQ99453 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 DDX50P1-201ENST00000438163 2400 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
PHOX2BQ99453 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PHOX2BQ99453 RNU6-657P-201ENST00000383904 107 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 FTH1P3-201ENST00000394290 584 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 AL080285.1-201ENST00000404225 984 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 RN7SKP26-201ENST00000410247 293 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 CHEK2P3-201ENST00000416118 248 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 AL807761.1-201ENST00000417622 171 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 NUP35P1-201ENST00000422734 947 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 TUBB4BP6-201ENST00000437576 479 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 FAM103A2P-201ENST00000444122 354 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 RPL7P22-201ENST00000466005 733 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 AC068587.1-201ENST00000483613 781 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 RNU6-559P-201ENST00000516151 98 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 RNU6-123P-201ENST00000516163 102 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 RNU6-1046P-201ENST00000516538 107 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 Y_RNA.720-201ENST00000517166 92 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PHOX2BQ99453 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 AL121579.2-201ENST00000555466 590 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 FRG2DP-202ENST00000566967 323 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 Z84480.1-201ENST00000605131 311 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 AC018690.1-201ENST00000608144 626 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 AC006335.3-201ENST00000613408 292 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 AL356274.1-201ENST00000617064 410 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms