Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CDC42P6-201ENST00000421246 576 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 MTCYBP10-201ENST00000424905 650 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 NIPA2P1-201ENST00000426223 976 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AL356583.2-201ENST00000426536 280 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 GAPDHP19-201ENST00000431768 1005 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC007563.3-201ENST00000433233 371 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 YWHAEP1-201ENST00000453697 763 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 RPS7P6-201ENST00000485777 579 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC012170.1-201ENST00000495139 359 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC005741.1-201ENST00000511094 432 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 IGKV2D-38-201ENST00000518423 240 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 OR5BK1P-201ENST00000550421 823 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC022106.2-201ENST00000620114 757 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 MIR6503-201ENST00000622884 86 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC099667.1-201ENST00000624222 469 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 CAP1P2-201ENST00000417455 1409 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 FANCD2P2-201ENST00000437591 1400 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 CDY19P-201ENST00000411668 1613 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 CDY18P-201ENST00000438294 1609 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 RN7SKP23-201ENST00000625159 4301 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC010894.1-201ENST00000313760 361 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 RNY3P3-201ENST00000363816 102 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 RN7SKP171-201ENST00000364417 303 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 Y_RNA.311-201ENST00000365068 96 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 RN7SKP187-201ENST00000365536 330 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 SNORA7A-201ENST00000384765 139 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AL356967.1-201ENST00000406305 431 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 ATP5BP1-201ENST00000411980 1574 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC019050.1-201ENST00000418508 492 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 FABP5P1-201ENST00000423401 411 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AL445669.1-201ENST00000426743 755 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 RLIMP2-201ENST00000427891 1563 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 CACYBPP1-201ENST00000438592 684 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC092601.1-201ENST00000444526 383 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 CBWD4P-201ENST00000445695 655 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 TRBV8-1-201ENST00000481590 279 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 RPL29P23-201ENST00000486188 442 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC015524.1-201ENST00000491585 472 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 CDH12P2-201ENST00000504393 298 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 FTH1P9-201ENST00000513251 355 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC010493.1-201ENST00000513479 292 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 RNA5SP473-201ENST00000516402 125 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC008802.1-201ENST00000519121 791 ntBASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.31□□□□□ -1.24
NPAS3Q8IXF0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms