Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL080312.2-201ENST00000613001 630 ntBASIC5.71□□□□□ -1.5
PER3P56645 AC011939.3-201ENST00000613686 466 ntBASIC5.71□□□□□ -1.5
PER3P56645 AC126175.1-201ENST00000617041 758 ntBASIC5.71□□□□□ -1.5
PER3P56645 AC024595.1-201ENST00000623088 387 ntBASIC5.71□□□□□ -1.5
PER3P56645 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PER3P56645 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PER3P56645 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PER3P56645 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.71□□□□□ -1.5
PER3P56645 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PER3P56645 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.71□□□□□ -1.5
PER3P56645 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PER3P56645 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PER3P56645 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.71□□□□□ -1.5
PER3P56645 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PER3P56645 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PER3P56645 AC138393.1-206ENST00000540997 1886 ntBASIC5.71□□□□□ -1.5
PER3P56645 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PER3P56645 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PER3P56645 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PER3P56645 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PER3P56645 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 AP002512.4-202ENST00000641599 4530 ntBASIC5.7□□□□□ -1.5
PER3P56645 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.7□□□□□ -1.5
PER3P56645 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 NACA3P-201ENST00000359690 648 ntBASIC5.7□□□□□ -1.5
PER3P56645 RNU6-666P-201ENST00000363499 107 ntBASIC5.7□□□□□ -1.5
PER3P56645 BMS1P3-201ENST00000372011 932 ntBASIC5.7□□□□□ -1.5
PER3P56645 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 SNORD116-9-201ENST00000384000 95 ntBASIC5.7□□□□□ -1.5
PER3P56645 SNORD116-3-201ENST00000384287 95 ntBASIC5.7□□□□□ -1.5
PER3P56645 SNORD116-7-201ENST00000384404 95 ntBASIC5.7□□□□□ -1.5
PER3P56645 SNORD116-5-201ENST00000384462 95 ntBASIC5.7□□□□□ -1.5
PER3P56645 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.7□□□□□ -1.5
PER3P56645 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.7□□□□□ -1.5
PER3P56645 TRGV6-201ENST00000417928 299 ntBASIC5.7□□□□□ -1.5
PER3P56645 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.7□□□□□ -1.5
PER3P56645 MTND6P12-201ENST00000428247 522 ntBASIC5.7□□□□□ -1.5
PER3P56645 HMGB1P45-201ENST00000435986 653 ntBASIC5.7□□□□□ -1.5
PER3P56645 ARL4AP3-201ENST00000441452 574 ntBASIC5.7□□□□□ -1.5
PER3P56645 RPS26P30-201ENST00000443431 335 ntBASIC5.7□□□□□ -1.5
PER3P56645 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.7□□□□□ -1.5
PER3P56645 CFL1P4-201ENST00000451536 498 ntBASIC5.7□□□□□ -1.5
PER3P56645 PPIAP7-201ENST00000454070 489 ntBASIC5.7□□□□□ -1.5
PER3P56645 AL133477.1-201ENST00000457472 514 ntBASIC5.7□□□□□ -1.5
PER3P56645 MTND2P28-201ENST00000457540 1044 ntBASIC5.7□□□□□ -1.5
PER3P56645 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.7□□□□□ -1.5
PER3P56645 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.7□□□□□ -1.5
PER3P56645 RAP1BP2-201ENST00000478270 544 ntBASIC5.7□□□□□ -1.5
PER3P56645 RPS3AP43-201ENST00000479743 781 ntBASIC5.7□□□□□ -1.5
PER3P56645 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 OR2A20P-203ENST00000498397 1268 ntBASIC5.7□□□□□ -1.5
PER3P56645 OR7E99P-201ENST00000505750 922 ntBASIC5.7□□□□□ -1.5
PER3P56645 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.7□□□□□ -1.5
PER3P56645 AC106800.3-201ENST00000511389 308 ntBASIC5.7□□□□□ -1.5
PER3P56645 NDUFB4P12-201ENST00000513465 390 ntBASIC5.7□□□□□ -1.5
PER3P56645 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.7□□□□□ -1.5
PER3P56645 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.7□□□□□ -1.5
PER3P56645 AC090819.1-201ENST00000523800 1111 ntBASIC5.7□□□□□ -1.5
PER3P56645 AP000620.1-201ENST00000527147 504 ntBASIC5.7□□□□□ -1.5
PER3P56645 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.7□□□□□ -1.5
PER3P56645 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.7□□□□□ -1.5
PER3P56645 LINC00556-201ENST00000569603 412 ntBASIC5.7□□□□□ -1.5
PER3P56645 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.7□□□□□ -1.5
PER3P56645 MIR4701-201ENST00000583094 63 ntBASIC5.7□□□□□ -1.5
PER3P56645 SS18L2P2-201ENST00000583960 235 ntBASIC5.7□□□□□ -1.5
PER3P56645 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.7□□□□□ -1.5
PER3P56645 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.7□□□□□ -1.5
PER3P56645 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.7□□□□□ -1.5
PER3P56645 AC125494.3-201ENST00000602759 455 ntBASIC5.7□□□□□ -1.5
PER3P56645 MRPS35P3-201ENST00000603189 709 ntBASIC5.7□□□□□ -1.5
PER3P56645 AL157899.1-201ENST00000604110 936 ntBASIC5.7□□□□□ -1.5
PER3P56645 AC080013.3-201ENST00000606839 578 ntBASIC5.7□□□□□ -1.5
PER3P56645 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.7□□□□□ -1.5
PER3P56645 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PER3P56645 GTF2H2B-203ENST00000508065 1432 ntBASIC5.7□□□□□ -1.5
PER3P56645 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 AC079753.1-201ENST00000623243 3868 ntBASIC5.7□□□□□ -1.5
PER3P56645 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.7□□□□□ -1.5
PER3P56645 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PER3P56645 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PER3P56645 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PER3P56645 AC062022.1-201ENST00000451026 1684 ntBASIC5.69□□□□□ -1.5
PER3P56645 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PER3P56645 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.69□□□□□ -1.5
PER3P56645 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PER3P56645 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PER3P56645 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
PER3P56645 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PER3P56645 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.69□□□□□ -1.5
PER3P56645 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PER3P56645 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms