Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC027369.5-201ENST00000533838 755 ntBASIC2.91□□□□□ -1.94
APOBP04114 FCF1-203ENST00000553615 954 ntTSL 3 BASIC2.91□□□□□ -1.94
APOBP04114 PRELID3BP3-201ENST00000584963 545 ntBASIC2.91□□□□□ -1.94
APOBP04114 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.91□□□□□ -1.94
APOBP04114 BX005214.3-202ENST00000619809 325 ntBASIC2.91□□□□□ -1.94
APOBP04114 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 ZNF137P-201ENST00000456718 1920 ntBASIC2.91□□□□□ -1.94
APOBP04114 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
APOBP04114 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 RNA5SP119-201ENST00000362715 117 ntBASIC2.91□□□□□ -1.94
APOBP04114 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC2.91□□□□□ -1.94
APOBP04114 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 ZNF415P1-201ENST00000582279 1166 ntBASIC2.91□□□□□ -1.94
APOBP04114 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 AC007382.1-201ENST00000624376 2618 ntBASIC2.91□□□□□ -1.94
APOBP04114 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
APOBP04114 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.91□□□□□ -1.94
APOBP04114 AC099670.2-201ENST00000435130 321 ntBASIC2.91□□□□□ -1.94
APOBP04114 AL157884.3-201ENST00000448273 1184 ntBASIC2.91□□□□□ -1.94
APOBP04114 AC116562.1-201ENST00000485355 781 ntBASIC2.91□□□□□ -1.94
APOBP04114 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
APOBP04114 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.91□□□□□ -1.94
APOBP04114 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC2.91□□□□□ -1.94
APOBP04114 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC2.91□□□□□ -1.94
APOBP04114 AL596275.2-208ENST00000641192 594 ntBASIC2.91□□□□□ -1.94
APOBP04114 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
APOBP04114 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC2.9□□□□□ -1.94
APOBP04114 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.9□□□□□ -1.94
APOBP04114 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.9□□□□□ -1.94
APOBP04114 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC2.9□□□□□ -1.94
APOBP04114 TCEA1P3-201ENST00000443005 880 ntBASIC2.9□□□□□ -1.94
APOBP04114 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.9□□□□□ -1.94
APOBP04114 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
APOBP04114 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.9□□□□□ -1.94
APOBP04114 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC2.9□□□□□ -1.94
APOBP04114 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.9□□□□□ -1.94
APOBP04114 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC2.9□□□□□ -1.94
APOBP04114 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC2.9□□□□□ -1.94
APOBP04114 AL354984.3-201ENST00000604803 325 ntBASIC2.9□□□□□ -1.94
APOBP04114 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC2.9□□□□□ -1.94
APOBP04114 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
APOBP04114 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC2.9□□□□□ -1.94
APOBP04114 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
APOBP04114 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC2.9□□□□□ -1.94
APOBP04114 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC2.9□□□□□ -1.94
APOBP04114 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
APOBP04114 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
APOBP04114 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
APOBP04114 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
APOBP04114 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
APOBP04114 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC2.9□□□□□ -1.94
APOBP04114 SPRR2C-201ENST00000290702 219 ntBASIC2.9□□□□□ -1.95
APOBP04114 RN7SKP185-201ENST00000362813 326 ntBASIC2.9□□□□□ -1.95
APOBP04114 RNA5SP366-201ENST00000365454 123 ntBASIC2.9□□□□□ -1.95
APOBP04114 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC2.9□□□□□ -1.95
APOBP04114 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC2.9□□□□□ -1.95
APOBP04114 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC2.9□□□□□ -1.95
APOBP04114 QRSL1P2-201ENST00000418582 964 ntBASIC2.9□□□□□ -1.95
APOBP04114 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC2.9□□□□□ -1.95
APOBP04114 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.9□□□□□ -1.95
APOBP04114 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC2.9□□□□□ -1.95
APOBP04114 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.9□□□□□ -1.95
APOBP04114 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.9□□□□□ -1.95
APOBP04114 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC2.9□□□□□ -1.95
APOBP04114 AC243756.2-201ENST00000618406 463 ntBASIC2.9□□□□□ -1.95
APOBP04114 AC009093.8-201ENST00000641769 292 ntBASIC2.9□□□□□ -1.95
APOBP04114 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC2.9□□□□□ -1.95
APOBP04114 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms