Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 DDX18P5-201ENST00000534547 1306 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AL133243.2-201ENST00000610331 1621 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 CASC19-248ENST00000641674 1356 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 VN2R3P-201ENST00000422626 1412 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC217777.1-201ENST00000570034 1471 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 BX005019.1-201ENST00000561881 1810 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC024587.1-201ENST00000505925 2157 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 CASC19-246ENST00000641625 1606 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 RN7SKP145-201ENST00000363291 303 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 RNA5SP346-201ENST00000363541 121 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AL672167.2-201ENST00000377164 879 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 RNU6-83P-201ENST00000384568 112 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC003045.1-201ENST00000398779 713 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 OOSP1-201ENST00000398992 1270 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 LYPLA1P3-201ENST00000402650 695 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC099535.1-201ENST00000408928 371 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 RN7SKP166-201ENST00000410812 305 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 RAP1BP1-201ENST00000412709 553 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 Z75741.2-201ENST00000417272 1167 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 RPP40P1-201ENST00000426762 456 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 GAPDHP19-201ENST00000431768 1005 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC096638.2-201ENST00000434965 711 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC128677.1-201ENST00000436016 442 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 YWHAZP2-201ENST00000440317 728 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC104978.1-201ENST00000449387 391 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 HIGD1AP16-201ENST00000450986 258 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC079080.1-201ENST00000479841 822 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 RPL34P33-201ENST00000486062 334 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 RPL23AP40-201ENST00000487630 390 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 RBM22P12-201ENST00000567098 1255 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AP005136.2-201ENST00000583253 1049 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 HIRAP1-201ENST00000605318 787 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AL159169.2-201ENST00000610061 1269 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 RN7SL261P-201ENST00000613441 282 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 AL078621.3-201ENST00000623707 2042 ntBASIC6.41□□□□□ -1.38
CCDC66A2RUB6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC66A2RUB6 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 RNU1-87P-201ENST00000363727 170 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 RNA5SP485-201ENST00000365053 119 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 BMS1P3-201ENST00000372011 932 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 RNU5A-2P-201ENST00000384337 116 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AL590084.1-201ENST00000407885 387 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 RNU4-72P-201ENST00000410754 173 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 RPF2P1-201ENST00000424137 906 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms