Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 RNU6-236P-201ENST00000363886 106 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC016739.1-201ENST00000405359 345 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 MTCO3P41-201ENST00000414801 328 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 RPL36P18-201ENST00000419316 318 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 RPS17P17-201ENST00000419392 409 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC098826.1-201ENST00000433943 471 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 FGF7P5-201ENST00000441829 291 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 CYCSP51-201ENST00000443545 318 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 RPL7L1P3-201ENST00000455249 689 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 RN7SL352P-201ENST00000466002 277 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 RPS23P6-201ENST00000466136 431 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 RN7SL860P-201ENST00000473738 223 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC093890.1-201ENST00000502554 540 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC008837.1-201ENST00000511513 412 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 RNA5SP92-201ENST00000516437 110 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 NRON-201ENST00000517270 370 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC104417.1-201ENST00000523974 751 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 HMGN2P36-201ENST00000529541 409 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC007115.1-201ENST00000546853 234 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC090695.1-201ENST00000561269 1222 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC015688.2-201ENST00000584523 262 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC005377.1-201ENST00000605126 456 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC004890.3-201ENST00000605566 1095 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AL021997.1-201ENST00000605757 193 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC016877.3-201ENST00000606778 504 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 RN7SL544P-201ENST00000617232 284 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 RN7SL763P-201ENST00000620922 284 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 AC087565.3-203ENST00000641018 837 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 CASC19-243ENST00000641588 1546 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 ECM1P2-201ENST00000503354 1577 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 BX284613.1-201ENST00000452221 1641 ntBASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDLIM7Q9NR12 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 FAM133CP-201ENST00000332869 704 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 RNU6-1251P-201ENST00000364502 107 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AL390237.1-201ENST00000404226 1415 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 SNRPEP6-201ENST00000407465 277 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 MIR1286-201ENST00000408112 78 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 RAD23BP2-201ENST00000416003 1207 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AK4P4-201ENST00000419465 646 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 NMD3P2-201ENST00000421815 761 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 MRRFP1-201ENST00000435941 1675 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 HMGB3P6-201ENST00000444896 598 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AC245100.2-201ENST00000454544 1679 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 NECAP1P2-201ENST00000455668 727 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 GYG1P1-201ENST00000460864 698 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AC083795.1-201ENST00000491760 320 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 CCDC11P1-201ENST00000503137 1162 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 AC110775.1-201ENST00000513721 462 ntBASIC6.63□□□□□ -1.35
PDLIM7Q9NR12 MTCO2P32-201ENST00000514865 403 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms