Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
DDX11Q96FC9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
DDX11Q96FC9 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DDX11Q96FC9 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DDX11Q96FC9 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DDX11Q96FC9 RNU5B-4P-201ENST00000363508 111 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AC234772.1-201ENST00000377927 937 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 OR2AT2P-201ENST00000413438 905 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 OSTCP5-201ENST00000425293 453 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 PRELID3BP10-201ENST00000431957 584 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 KRT8P51-201ENST00000438938 274 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 CYCSP20-201ENST00000473154 315 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 AC099521.1-201ENST00000482557 334 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 RN7SL629P-201ENST00000489622 285 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 HMGB1P47-201ENST00000511281 589 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 ATP5LP3-201ENST00000514223 304 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AC126615.2-201ENST00000553003 515 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
DDX11Q96FC9 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 NBR2-204ENST00000587322 63 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 AL513327.3-201ENST00000602618 469 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 HULC.1-201ENST00000612720 240 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 AC000095.2-202ENST00000637415 154 ntBASIC6.81□□□□□ -1.32
DDX11Q96FC9 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
DDX11Q96FC9 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
DDX11Q96FC9 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
DDX11Q96FC9 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
DDX11Q96FC9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC116158.1-201ENST00000560231 2129 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
DDX11Q96FC9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
DDX11Q96FC9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 AL355834.1-201ENST00000556602 3965 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
DDX11Q96FC9 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
DDX11Q96FC9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 U3.10-201ENST00000364459 214 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
DDX11Q96FC9 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
DDX11Q96FC9 RNU6-468P-201ENST00000384003 109 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 U3.23-201ENST00000391132 200 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 Y_RNA.599-201ENST00000410489 109 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AK4P4-201ENST00000419465 646 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 ARAFP1-201ENST00000422172 605 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC096775.1-201ENST00000437724 448 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC093166.4-201ENST00000457867 318 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 NENFP3-201ENST00000503735 313 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 HMGB1P46-201ENST00000520062 610 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 HMGN2P36-201ENST00000529541 409 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 MIR3176-201ENST00000582210 90 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC015802.2-201ENST00000589690 189 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC124856.1-201ENST00000600819 896 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AL589674.2-201ENST00000604304 337 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC145423.1-201ENST00000605712 336 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC093673.2-201ENST00000609674 331 ntBASIC6.8□□□□□ -1.32
DDX11Q96FC9 AC241377.1-201ENST00000619797 406 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms