Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 RNA5SP249-201ENST00000516127 99 ntBASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 AC005868.1-201ENST00000536421 331 ntBASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 AC104687.2-201ENST00000604442 342 ntBASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 NXF4-202ENST00000416098 1465 ntBASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 ECM1P2-201ENST00000503354 1577 ntBASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 AC245100.2-201ENST00000454544 1679 ntBASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 AL022393.1-201ENST00000625142 1677 ntBASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.12□□□□□ -1.59
CDKL3Q8IVW4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 BMS1P3-201ENST00000372011 932 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AL136116.2-201ENST00000404020 785 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC092162.1-201ENST00000432828 434 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 COX6B1P5-201ENST00000509843 249 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 RNA5SP303-201ENST00000516192 130 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 OR7E128P-201ENST00000532736 1024 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC018552.1-201ENST00000562099 811 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC007225.2-201ENST00000562529 256 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC011447.4-201ENST00000587562 111 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AP002884.5-201ENST00000595053 1132 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC124856.1-201ENST00000600819 896 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC087783.2-201ENST00000605070 562 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AL049794.2-201ENST00000616301 365 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC019206.1-201ENST00000621938 425 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 PABPC1P6-201ENST00000445594 1829 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 AC093775.1-201ENST00000624154 1868 ntBASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.11□□□□□ -1.59
CDKL3Q8IVW4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 SNURFL-201ENST00000309296 343 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 MIR223-201ENST00000385204 110 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 GAPDHP15-201ENST00000398586 975 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 U3.36-201ENST00000408418 213 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 MTND5P23-201ENST00000430812 1655 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 AL136455.1-201ENST00000441083 1240 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 NDUFA5P8-201ENST00000449019 346 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 RN7SL517P-201ENST00000462240 305 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 RN7SL515P-201ENST00000463999 297 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 HMGN2P25-201ENST00000486956 268 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 RN7SL30P-201ENST00000488416 306 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 AC023424.1-201ENST00000496058 459 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 AC072052.1-201ENST00000496556 306 ntBASIC5.1□□□□□ -1.59
CDKL3Q8IVW4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms