Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RPL23AP59-201ENST00000399415 461 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 ACTR3P2-201ENST00000439585 1257 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 RPL7AP52-201ENST00000458096 790 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 RN7SL188P-201ENST00000469842 285 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AC098976.1-201ENST00000513014 541 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 SNORA74D-201ENST00000516404 141 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AL645608.4-201ENST00000423619 154 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AL162591.2-201ENST00000449634 317 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 snoU109.5-201ENST00000516231 132 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 PMS2P3-207ENST00000529061 717 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 MIR3944-201ENST00000581277 108 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AC090948.2-201ENST00000607363 564 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AC011504.1-201ENST00000623331 4103 ntBASIC4.81□□□□□ -1.64
RIF1Q5UIP0 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.81□□□□□ -1.64
RIF1Q5UIP0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 RNF10P1-201ENST00000418589 369 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 CRIP1P1-201ENST00000427567 185 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 AL451136.1-201ENST00000435399 325 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 SCARNA10-201ENST00000459255 330 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 AC015813.6-201ENST00000624409 5808 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 SAMMSON-210ENST00000641260 1308 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 OR5P1P-201ENST00000299512 925 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 AL590762.2-201ENST00000395798 571 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 SNORA77-201ENST00000408716 125 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 PDSS1P1-201ENST00000422953 1114 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 AL133547.1-201ENST00000448546 220 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 GAPDHP62-201ENST00000515313 990 ntBASIC4.8□□□□□ -1.64
RIF1Q5UIP0 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RIF1Q5UIP0 AC110373.1-201ENST00000505994 3505 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 ECM1P2-201ENST00000503354 1577 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 MIR383-201ENST00000362257 73 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 RNA5SP119-201ENST00000362715 117 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 SNORA62.3-201ENST00000365110 153 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms