Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.12□□□□□ -1.59
BRCA2P51587 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.12□□□□□ -1.59
BRCA2P51587 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
BRCA2P51587 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.12□□□□□ -1.59
BRCA2P51587 AC024023.1-201ENST00000624530 922 ntBASIC5.12□□□□□ -1.59
BRCA2P51587 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC5.12□□□□□ -1.59
BRCA2P51587 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRCA2P51587 AC010478.1-201ENST00000601500 6762 ntBASIC5.12□□□□□ -1.59
BRCA2P51587 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
BRCA2P51587 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRCA2P51587 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRCA2P51587 AC021146.4-201ENST00000309229 279 ntBASIC5.11□□□□□ -1.59
BRCA2P51587 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.11□□□□□ -1.59
BRCA2P51587 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.11□□□□□ -1.59
BRCA2P51587 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.11□□□□□ -1.59
BRCA2P51587 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.11□□□□□ -1.59
BRCA2P51587 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.11□□□□□ -1.59
BRCA2P51587 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.11□□□□□ -1.59
BRCA2P51587 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
BRCA2P51587 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
BRCA2P51587 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.11□□□□□ -1.59
BRCA2P51587 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
BRCA2P51587 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
BRCA2P51587 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 U3.53-201ENST00000628922 216 ntBASIC5.11□□□□□ -1.59
BRCA2P51587 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.11□□□□□ -1.59
BRCA2P51587 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC5.11□□□□□ -1.59
BRCA2P51587 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
BRCA2P51587 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
BRCA2P51587 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
BRCA2P51587 RNA5SP130-201ENST00000364431 114 ntBASIC5.11□□□□□ -1.59
BRCA2P51587 RNU6-1279P-201ENST00000383917 103 ntBASIC5.11□□□□□ -1.59
BRCA2P51587 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.11□□□□□ -1.59
BRCA2P51587 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.11□□□□□ -1.59
BRCA2P51587 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.11□□□□□ -1.59
BRCA2P51587 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.11□□□□□ -1.59
BRCA2P51587 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.11□□□□□ -1.59
BRCA2P51587 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.11□□□□□ -1.59
BRCA2P51587 AC084757.4-201ENST00000616350 526 ntBASIC5.11□□□□□ -1.59
BRCA2P51587 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.11□□□□□ -1.59
BRCA2P51587 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
BRCA2P51587 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRCA2P51587 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
BRCA2P51587 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
BRCA2P51587 AL451142.1-201ENST00000375867 775 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 RN7SKP267-201ENST00000410381 285 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 RPL23AP52-201ENST00000439311 478 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 AC073052.1-201ENST00000440417 714 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.1□□□□□ -1.59
BRCA2P51587 RPS7P7-201ENST00000463499 571 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 AL354984.3-201ENST00000604803 325 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.1□□□□□ -1.59
BRCA2P51587 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
BRCA2P51587 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.1□□□□□ -1.59
BRCA2P51587 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 AC092162.3-201ENST00000624511 1624 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 MALAT1-202ENST00000534336 8708 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.1□□□□□ -1.59
BRCA2P51587 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
BRCA2P51587 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.1□□□□□ -1.59
BRCA2P51587 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.1□□□□□ -1.59
BRCA2P51587 AC005899.7-201ENST00000618199 588 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
BRCA2P51587 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
BRCA2P51587 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.1□□□□□ -1.59
BRCA2P51587 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.1□□□□□ -1.59
BRCA2P51587 E2F6P2-201ENST00000420708 748 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.1□□□□□ -1.59
BRCA2P51587 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.1□□□□□ -1.59
BRCA2P51587 RN7SKP98-201ENST00000517070 156 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.1□□□□□ -1.59
BRCA2P51587 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.1□□□□□ -1.59
BRCA2P51587 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.1□□□□□ -1.59
BRCA2P51587 RNU4-89P-201ENST00000607443 133 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 AC135352.1-201ENST00000506173 1418 ntBASIC5.1□□□□□ -1.59
BRCA2P51587 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCA2P51587 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC5.09□□□□□ -1.59
BRCA2P51587 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms