Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 IGBP1P4-201ENST00000503202 879 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-1P43699 AC112484.3-201ENST00000505910 329 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-1P43699 TPT1P8-201ENST00000510120 555 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 MTCO3P27-201ENST00000514397 196 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 EIF3KP3-201ENST00000514461 639 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-1P43699 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-1P43699 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-1P43699 OR11H3P-201ENST00000554547 982 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AC006349.1-201ENST00000555526 235 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 AC040958.1-201ENST00000561102 201 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 AC138207.8-204ENST00000579588 527 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-1P43699 AP005119.1-201ENST00000580956 292 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AC005244.1-201ENST00000582566 339 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-1P43699 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-1P43699 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.5□□□□□ -1.69
NKX2-1P43699 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 AC068768.2-201ENST00000602352 343 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-1P43699 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-1P43699 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-1P43699 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.5□□□□□ -1.69
NKX2-1P43699 OR4G3P-201ENST00000633500 913 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-1P43699 AL445984.1-201ENST00000637834 659 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 CASC19-274ENST00000642018 970 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
NKX2-1P43699 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 PSG10P-201ENST00000501199 1500 ntBASIC4.5□□□□□ -1.69
NKX2-1P43699 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-1P43699 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
NKX2-1P43699 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-1P43699 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NKX2-1P43699 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 MFSD8-213ENST00000641134 1327 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
NKX2-1P43699 AC019072.1-201ENST00000604535 1551 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 GAPDHP24-201ENST00000328713 983 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AC017079.1-201ENST00000333650 415 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 RNU6-1000P-201ENST00000391066 106 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 RNU6-796P-201ENST00000391086 107 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 BX664727.1-201ENST00000416024 466 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 TRGV6-201ENST00000417928 299 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-1P43699 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.49□□□□□ -1.69
NKX2-1P43699 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NKX2-1P43699 MTCO1P43-201ENST00000431831 488 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-1P43699 GAPDHP59-201ENST00000435908 267 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 CLNS1AP1-201ENST00000435954 682 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 TIMM8BP2-201ENST00000445940 251 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AC012512.1-201ENST00000446594 718 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AC097463.1-201ENST00000447288 481 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AC005077.1-201ENST00000449226 375 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 RN7SL57P-201ENST00000493687 290 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-1P43699 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-1P43699 AC091874.2-201ENST00000505889 720 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-1P43699 DUTP7-201ENST00000507982 486 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-1P43699 AC011411.1-201ENST00000509592 876 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-1P43699 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-1P43699 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.49□□□□□ -1.69
NKX2-1P43699 OR8A2P-201ENST00000528631 952 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-1P43699 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-1P43699 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-1P43699 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-1P43699 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-1P43699 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.49□□□□□ -1.69
NKX2-1P43699 AC092332.1-201ENST00000563684 829 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 RBM22P12-201ENST00000567098 1255 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms