Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD13P35453 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD13P35453 RNU6-249P-201ENST00000363016 102 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 AC007618.1-201ENST00000366455 732 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD13P35453 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXD13P35453 U3.32-201ENST00000408116 212 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXD13P35453 AC009238.2-201ENST00000431026 355 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HOXD13P35453 RPS29P10-201ENST00000439197 166 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 CNOT7P2-201ENST00000441051 832 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 RPS11P7-201ENST00000442125 465 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 AC009127.1-201ENST00000467090 155 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 AC037198.2-201ENST00000478845 733 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 AC008953.1-201ENST00000497334 318 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXD13P35453 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXD13P35453 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXD13P35453 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXD13P35453 AP002373.2-201ENST00000541631 1060 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXD13P35453 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD13P35453 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXD13P35453 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXD13P35453 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXD13P35453 AC006453.5-201ENST00000636451 619 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD13P35453 TTC39DP-201ENST00000416781 1688 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD13P35453 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXD13P35453 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD13P35453 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD13P35453 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXD13P35453 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXD13P35453 AL603750.1-201ENST00000624216 1717 ntBASIC5.68□□□□□ -1.5
HOXD13P35453 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD13P35453 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD13P35453 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HOXD13P35453 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HOXD13P35453 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD13P35453 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HOXD13P35453 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 OR8V1P-201ENST00000395193 873 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 Z86062.1-201ENST00000406773 777 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 UBE2V1P15-201ENST00000407776 448 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 RN7SKP229-201ENST00000410465 302 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXD13P35453 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD13P35453 BX323845.1-201ENST00000432417 179 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 AL161722.2-201ENST00000434731 981 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD13P35453 AC092647.2-201ENST00000452998 253 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 RN7SL727P-201ENST00000482164 296 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXD13P35453 MTCO1P31-201ENST00000506355 492 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD13P35453 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD13P35453 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD13P35453 AC024940.3-201ENST00000538551 316 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD13P35453 AC007225.2-201ENST00000562529 256 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXD13P35453 AC005242.1-201ENST00000585658 438 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD13P35453 AL355802.4-201ENST00000607635 548 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 AC126915.2-201ENST00000610957 190 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 AP002505.2-201ENST00000623585 696 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 AC145207.9-201ENST00000623802 325 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD13P35453 FRG1EP-201ENST00000634469 770 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
HOXD13P35453 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD13P35453 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD13P35453 AL360270.2-201ENST00000562952 5985 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 AC093849.1-201ENST00000563631 2209 ntBASIC5.67□□□□□ -1.5
HOXD13P35453 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HOXD13P35453 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD13P35453 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD13P35453 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD13P35453 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
HOXD13P35453 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXD13P35453 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXD13P35453 RAD1P1-201ENST00000231383 813 ntBASIC5.66□□□□□ -1.5
HOXD13P35453 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HOXD13P35453 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD13P35453 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms