Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 KATNBL1P4-201ENST00000503545 918 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC108043.1-201ENST00000512696 574 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC110775.1-201ENST00000513721 462 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 OR8A2P-201ENST00000528631 952 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC063949.1-201ENST00000552900 865 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC126323.6-202ENST00000568092 3511 ntBASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5□□□□□ -1.61
TMX2-CTNND1H3BSU7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 STX3-208ENST00000641815 3236 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC079298.1-201ENST00000625026 1619 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 RNA5SP90-201ENST00000364801 99 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AP002530.1-201ENST00000405705 684 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 HSPE1P16-201ENST00000426640 348 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 RPL19P16-201ENST00000433839 588 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 TPT1P13-201ENST00000449760 499 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 GYG1P1-201ENST00000460864 698 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 RN7SL860P-201ENST00000473738 223 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AP000797.2-201ENST00000475768 606 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 RPL37AP8-201ENST00000494116 276 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC006427.1-201ENST00000514359 712 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC008147.3-201ENST00000548666 354 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL356608.1-201ENST00000610034 820 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC015660.5-201ENST00000623238 564 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC015871.5-202ENST00000623252 701 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 CASC19-221ENST00000641309 1382 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 MIPEPP2-201ENST00000422560 1819 ntBASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.99□□□□□ -1.61
TMX2-CTNND1H3BSU7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 RNU6-673P-201ENST00000365084 104 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 RNA5SP455-201ENST00000365190 119 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL353625.1-202ENST00000366273 571 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 FAR2P2-201ENST00000413041 594 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 FAR2P4-202ENST00000425399 584 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC105233.1-201ENST00000498840 781 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 AC140172.1-201ENST00000502928 141 ntBASIC4.98□□□□□ -1.61
TMX2-CTNND1H3BSU7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms