Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AL445928.1-201ENST00000435545 222 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 SNRPFP2-201ENST00000440710 251 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 RPS27P5-201ENST00000444247 244 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AL157827.1-201ENST00000447622 132 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC020898.1-201ENST00000474167 787 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC091544.1-201ENST00000484702 348 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 BX510359.5-201ENST00000515651 304 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 BUD31P1-201ENST00000521828 359 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 MTCO2P2-201ENST00000591258 225 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 FO393422.1-201ENST00000603908 708 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 FAM27E4-201ENST00000605259 342 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC079395.2-201ENST00000610982 737 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC037198.3-201ENST00000616754 526 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC048344.4-201ENST00000619744 527 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AL136228.1-201ENST00000622221 319 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 MTCO1P7-201ENST00000419523 1542 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 OR13C1P-202ENST00000641378 2919 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC144833.1-201ENST00000567953 4089 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 AC012254.3-201ENST00000591183 2117 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 RNA5SP453-201ENST00000362503 119 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 RNA5SP132-201ENST00000364725 118 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 ZNF602P-201ENST00000405929 924 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 RNU2-17P-201ENST00000410290 190 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AL445183.3-201ENST00000414168 502 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 SSR1P2-201ENST00000415208 787 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 VPS26BP1-201ENST00000417155 755 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 RPS4XP5-201ENST00000419038 768 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 MTCYBP29-201ENST00000436327 1006 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 GAPDHP58-201ENST00000438477 1006 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 ELOCP13-201ENST00000443934 329 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 RPL6P5-201ENST00000445678 828 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AL445466.1-201ENST00000448432 357 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC023245.1-201ENST00000468501 517 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 RN7SL799P-201ENST00000475891 298 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 SIAH1P1-201ENST00000479411 923 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC116562.1-201ENST00000485355 781 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC010374.1-201ENST00000503762 1237 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 OR8Q1P-201ENST00000526467 655 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AP001804.2-201ENST00000533932 910 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC126615.2-201ENST00000553003 515 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 GARSP1-201ENST00000570895 719 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 MIR4776-2-201ENST00000580204 80 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AL022067.1-201ENST00000602426 454 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 AC104695.2-201ENST00000605056 775 ntBASIC5.55□□□□□ -1.52
VPS4AQ9UN37 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 418.7 ms