Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC016292.2-201ENST00000618967 210 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR6880-201ENST00000622851 62 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AL096814.1-201ENST00000623004 580 ntAPPRIS ALT2 TSL 3 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AL353662.3-201ENST00000625131 237 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SSBP4-215ENST00000625926 162 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AL359644.1-201ENST00000635872 471 ntTSL 3 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC073869.5-201ENST00000635979 465 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 FAM236C-201ENST00000636267 463 ntAPPRIS P5 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC103706.3-201ENST00000636297 85 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 FRMD5-212ENST00000636859 958 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC247036.7-201ENST00000639643 304 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RAB29-202ENST00000367139 3272 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AL590004.4-201ENST00000566733 7060 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC103988.1-201ENST00000566382 2177 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SEC16A-204ENST00000313084 3073 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CYP2B6-201ENST00000324071 3054 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 NCMAP-201ENST00000374392 3953 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AP000547.3-204ENST00000588548 2523 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CFAP65-207ENST00000441968 3416 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF473-201ENST00000270617 4688 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC016590.1-205ENST00000612804 2303 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 FAN1-203ENST00000561607 2690 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC040160.1-201ENST00000573063 2677 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ZFP64-204ENST00000371515 3040 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC008870.1-201ENST00000566996 3009 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 EIF4BP5-201ENST00000567338 1795 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RELA-205ENST00000525693 3183 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CTAGE6-201ENST00000470691 2608 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC011815.1-201ENST00000586922 4382 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 GDNF-AS1-205ENST00000637926 3819 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 STAU1-202ENST00000347458 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 STAU1-204ENST00000371792 3130 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 FAM71F2-205ENST00000641605 5749 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 MAK-201ENST00000313243 3984 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF197-202ENST00000344387 3275 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LRRC10-201ENST00000361484 2599 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 MADD-205ENST00000395344 4988 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ABCB1-201ENST00000265724 4645 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 MROH7-203ENST00000395690 3413 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC012409.5-201ENST00000624746 3424 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AC104024.2-201ENST00000562897 3077 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 PRAMEF15-201ENST00000376152 1865 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 HCP5B-201ENST00000630472 1889 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 HK2P1-201ENST00000447818 2737 ntBASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ACSBG2-202ENST00000586696 2739 ntAPPRIS P3 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 CHERP-201ENST00000198939 4084 ntTSL 5 BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 TRPV3-201ENST00000301365 3235 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 KCNE1-208ENST00000611936 3222 ntAPPRIS P1 TSL 4 BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 UHRF2P1-201ENST00000431339 2387 ntBASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 CACNB4-209ENST00000534999 2369 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 RBMX2-201ENST00000305536 1528 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
KRTAP4-4Q9BYR3 CACNG4-201ENST00000262138 3380 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms