Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC069209.1-201ENST00000619282 651 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AL445528.2-201ENST00000620582 470 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC023245.2-201ENST00000530760 2978 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ATP5F1P3-201ENST00000397213 657 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC093162.1-201ENST00000419682 124 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 SETP10-201ENST00000424368 814 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AL662874.1-201ENST00000426065 230 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RSL24D1P8-201ENST00000434442 492 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RPS27P26-201ENST00000494583 239 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC105313.1-201ENST00000509121 353 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AP001858.2-201ENST00000536213 601 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 FCF1-203ENST00000553615 954 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC012417.1-201ENST00000582307 1039 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC126177.8-201ENST00000618339 1015 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AL591848.4-201ENST00000567832 3472 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RNU6-304P-201ENST00000364855 107 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 U8.7-201ENST00000364940 136 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC013442.1-201ENST00000397347 228 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 MTND4P20-201ENST00000424125 869 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 PRSS3P4-201ENST00000453323 162 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 RN7SL205P-201ENST00000490174 284 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 NENFP3-201ENST00000503735 313 ntBASIC1.88□□□□□ -2.11
HMCN1Q96RW7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN1Q96RW7 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms