Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AL133351.3-201ENST00000454998 193 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 RN7SL338P-201ENST00000481467 293 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 MTND1P3-201ENST00000484956 952 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC093325.1-201ENST00000508378 326 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC010486.1-201ENST00000511793 424 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 RNU2-46P-201ENST00000517038 113 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 TPM3P3-201ENST00000521343 354 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 COX6B1P6-201ENST00000522347 255 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 HIF1AP1-201ENST00000553642 175 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 RN7SL786P-201ENST00000579130 298 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC022884.3-201ENST00000579571 248 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 RN7SL835P-201ENST00000579920 262 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 CKS1BP3-201ENST00000600888 237 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 LLPHP1-201ENST00000603571 367 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AL035413.2-201ENST00000604801 525 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC011816.2-201ENST00000607089 556 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AP004247.4-201ENST00000608484 942 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC068726.1-201ENST00000610993 341 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC006335.3-201ENST00000613408 292 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 U1.34-201ENST00000618578 162 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC006504.8-201ENST00000621046 635 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 SOCS5P5-201ENST00000402732 1586 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 DDX50P1-201ENST00000438163 2400 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 AC119744.1-201ENST00000454746 1715 ntBASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHGA11Q9Y5H2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AL133243.4-201ENST00000623116 3109 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 SNRPEP3-201ENST00000338402 276 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RNU4-79P-201ENST00000362764 141 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RN7SKP211-201ENST00000363328 315 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RN7SKP36-201ENST00000363997 312 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 SNORD115.1-201ENST00000391109 76 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC113608.1-201ENST00000398740 305 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RNU6-195P-201ENST00000411352 109 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 IFNA12P-201ENST00000413147 571 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 MTND3P17-201ENST00000416968 344 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 GAPDHP69-201ENST00000425504 1008 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RPSAP62-201ENST00000432596 833 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RPL22P17-201ENST00000438729 315 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 CBX1P1-201ENST00000440184 427 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms