Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 AC107081.3-201ENST00000612715 2034 ntBASIC2.07□□□□□ -2.08
LCE3DQ9BYE3 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AC104083.1-201ENST00000569449 2615 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 HSPD1P8-201ENST00000400121 1658 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 PLAG1-202ENST00000423799 1684 ntTSL 2 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AC078880.4-201ENST00000617627 1749 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AC005294.1-201ENST00000355509 281 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RNU5E-1-201ENST00000362477 120 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RNU6-984P-201ENST00000363236 109 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RNU6-289P-201ENST00000364093 107 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RNU6-359P-201ENST00000365466 108 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RNU6-744P-201ENST00000365557 107 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 S100A4-204ENST00000368716 600 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 SCNM1-201ENST00000368902 869 ntTSL 2 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 Y_RNA.422-201ENST00000384054 114 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RNU6-74P-201ENST00000384235 107 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RNU6-1316P-201ENST00000384242 108 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RNU6-738P-201ENST00000384531 106 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 MIR629-201ENST00000385230 97 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RNU6-1158P-201ENST00000391167 107 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RPL5P5-201ENST00000392009 893 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 KRTAP9-1-201ENST00000398470 753 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AL391419.1-201ENST00000398901 1275 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 DHFRP6-201ENST00000401776 268 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AL136116.1-201ENST00000403591 381 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 ANXA2P3-201ENST00000404883 1008 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AL136968.2-201ENST00000407959 354 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RN7SKP240-201ENST00000410583 375 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RN7SKP207-201ENST00000411204 303 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RPL12P9-201ENST00000412942 488 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AC073136.2-201ENST00000417282 849 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RAC1P4-201ENST00000419413 579 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AC008155.1-201ENST00000421078 329 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RBM22P7-201ENST00000421321 280 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 MTCO2P5-201ENST00000422621 426 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 MTND2P23-201ENST00000422990 651 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 CCDC144NL-AS1-202ENST00000423473 839 ntTSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RPL35AP12-201ENST00000425362 338 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RPL5P34-201ENST00000426545 891 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AL359921.1-201ENST00000433131 494 ntTSL 3 BASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 Z83313.1-201ENST00000433780 718 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 GPR143P-201ENST00000434155 205 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 AC236972.2-201ENST00000434979 310 ntBASIC2.06□□□□□ -2.08
LCE3DQ9BYE3 RPSAP17-201ENST00000437336 883 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms