Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC46A1Q96NT5 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC46A1Q96NT5 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SLC46A1Q96NT5 AL133268.1-201ENST00000405676 1401 ntBASIC5.64□□□□□ -1.51
SLC46A1Q96NT5 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.64□□□□□ -1.51
SLC46A1Q96NT5 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC46A1Q96NT5 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC012078.1-201ENST00000405035 1646 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 ANKRD36P1-201ENST00000344424 659 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 SNORD116-2-201ENST00000384274 95 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 SNORD116-6-201ENST00000384711 96 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 RN7SKP166-201ENST00000410812 305 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 DPPA2P3-201ENST00000411853 655 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 HMGB3P31-201ENST00000413333 595 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 MRPL53P1-201ENST00000414323 319 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AL596448.1-201ENST00000415024 392 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 NMD3P2-201ENST00000421815 761 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 OR5W1P-201ENST00000423705 938 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 RPS4XP16-201ENST00000427198 791 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 HMGB3P24-201ENST00000433260 622 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AL445928.1-201ENST00000435545 222 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AL589880.1-201ENST00000448271 287 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 Z99714.1-201ENST00000450463 807 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC008088.1-201ENST00000580993 280 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 VN1R78P-201ENST00000597393 564 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC010975.3-201ENST00000618727 978 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC091304.6-201ENST00000619761 202 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AP002782.1-201ENST00000623107 614 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC024023.1-201ENST00000624530 922 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AP003399.1-201ENST00000637534 361 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AL731532.1-201ENST00000623972 4236 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 AC034229.2-201ENST00000566945 2508 ntBASIC5.63□□□□□ -1.51
SLC46A1Q96NT5 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 OR10R3P-201ENST00000361688 942 ntBASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 SNORA70-201ENST00000384436 135 ntBASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 SNORD116-12-201ENST00000384468 92 ntBASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 RNU6-636P-201ENST00000384598 107 ntBASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 MCTS2P-201ENST00000394552 546 ntBASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 AL136310.1-201ENST00000404926 654 ntBASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 AC015977.1-201ENST00000418887 292 ntBASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC46A1Q96NT5 TNPO1P1-201ENST00000423641 1138 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms