Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 RN7SKP191-201ENST00000364713 306 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 RN7SKP55-201ENST00000364888 307 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AC026310.1-201ENST00000396004 378 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 MRPL42P2-201ENST00000403169 426 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 MIR1275-201ENST00000408770 80 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 RN7SKP139-201ENST00000410411 293 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AC127391.1-201ENST00000411737 98 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AC092042.2-201ENST00000417304 331 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AC007394.1-201ENST00000421941 531 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 SETP9-201ENST00000423837 832 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.69□□□□□ -1.18
HLA-CQ95604 ATP5JP1-201ENST00000431631 322 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AC006335.2-201ENST00000437993 330 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 CXCR2P1-202ENST00000443392 1074 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 ARL2BPP10-201ENST00000446487 531 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.69□□□□□ -1.18
HLA-CQ95604 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 AC091982.1-202ENST00000473923 343 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AL591122.1-201ENST00000487348 492 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.69□□□□□ -1.18
HLA-CQ95604 RN7SL775P-201ENST00000498361 336 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 HMGB1P23-201ENST00000518743 568 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AC107953.1-201ENST00000522216 297 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC7.69□□□□□ -1.18
HLA-CQ95604 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC7.69□□□□□ -1.18
HLA-CQ95604 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC7.69□□□□□ -1.18
HLA-CQ95604 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 MT1CP-201ENST00000567054 174 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 MIR4742-201ENST00000581069 85 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 AL133173.2-201ENST00000614270 90 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 AC233309.1-201ENST00000619522 751 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.69□□□□□ -1.18
HLA-CQ95604 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
HLA-CQ95604 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
HLA-CQ95604 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.69□□□□□ -1.18
HLA-CQ95604 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-CQ95604 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 NF1P1-201ENST00000604105 2645 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
HLA-CQ95604 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
HLA-CQ95604 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 AP003471.1-202ENST00000319051 1988 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.68□□□□□ -1.18
HLA-CQ95604 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.68□□□□□ -1.18
HLA-CQ95604 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 ASNSP1-204ENST00000641977 1664 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
HLA-CQ95604 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 RNU6-223P-201ENST00000362830 107 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 Y_RNA.184-201ENST00000363884 108 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 RN7SKP261-201ENST00000410948 278 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.68□□□□□ -1.18
HLA-CQ95604 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-CQ95604 SNRPEP4-201ENST00000435815 279 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC7.68□□□□□ -1.18
HLA-CQ95604 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-CQ95604 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-CQ95604 SS18L2P1-201ENST00000445923 213 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 PMS2P11-201ENST00000451831 574 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 HIGD1AP8-201ENST00000453927 274 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AC010878.1-201ENST00000456500 1047 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-CQ95604 CCDC34P1-201ENST00000507441 517 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AC093677.1-201ENST00000514414 678 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms