Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC097359.1-201ENST00000447946 463 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 OR51B8P-201ENST00000449892 769 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AL591363.1-201ENST00000450091 483 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC002553.3-201ENST00000453002 341 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 RNU1-88P-201ENST00000459274 128 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC090602.1-201ENST00000469695 252 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 OR7E22P-201ENST00000478335 1035 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC006539.1-201ENST00000481419 501 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 SNRPCP11-201ENST00000492453 205 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 GUSBP9-201ENST00000510138 584 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 CR383658.1-201ENST00000514609 734 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 SNORA70.11-201ENST00000515987 138 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 SNORA70.13-201ENST00000516116 138 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC134669.1-201ENST00000581275 672 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC015802.2-201ENST00000589690 189 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC040904.1-201ENST00000590850 223 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AL035411.2-201ENST00000604022 421 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AL645933.2-201ENST00000606743 1207 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC007786.3-201ENST00000615154 596 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC010435.1-201ENST00000623353 1177 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AL357562.1-201ENST00000624911 609 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC009962.1-201ENST00000567327 3813 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 MRRFP1-201ENST00000435941 1675 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 SNORA5.1-201ENST00000384275 131 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 Y_RNA.472-201ENST00000384322 102 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 MIR551B-201ENST00000384984 96 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 HMGB1P13-201ENST00000406019 642 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AL035422.1-201ENST00000414193 397 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 LINC01347-201ENST00000417964 355 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AL513175.2-201ENST00000422071 443 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 FO393419.3-201ENST00000428741 282 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC084290.1-201ENST00000434995 374 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 MRPL35P2-201ENST00000448009 511 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AL589880.1-201ENST00000448271 287 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC117522.2-201ENST00000510049 657 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 GAPDHP62-201ENST00000515313 990 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 NPIPB14P-203ENST00000532298 987 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AC007834.2-201ENST00000536310 343 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 ZNF321P-202ENST00000550843 495 ntBASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCHD4Q6ZW05 MIR4701-201ENST00000583094 63 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms