Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 GPS2P1-201ENST00000411761 986 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AC004980.3-201ENST00000447046 365 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 RPL10P17-201ENST00000453852 316 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 RPSAP51-201ENST00000497462 645 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 RNU4ATAC18P-201ENST00000516179 126 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AC008782.1-201ENST00000603386 430 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AL445423.1-201ENST00000609941 536 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AC009704.2-201ENST00000618739 483 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 LDHA-225ENST00000625635 141 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 OR56B2P-202ENST00000641377 2453 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AL360270.2-201ENST00000562952 5985 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 FHIT-201ENST00000341848 174 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 RNA5SP453-201ENST00000362503 119 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AC007618.1-201ENST00000366455 732 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 LINC00993-201ENST00000420453 540 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 OR5M12P-201ENST00000423388 929 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 RPL12P34-201ENST00000424532 479 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 RPEP3-201ENST00000425462 676 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AC073091.2-201ENST00000603205 907 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 AC016717.3-201ENST00000624730 554 ntBASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC141Q6ZP82 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 RNU11-201ENST00000387069 134 ntBASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 NPM1P36-201ENST00000415681 835 ntBASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 CENPIP1-201ENST00000425713 902 ntBASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 PRPF38AP1-201ENST00000451976 933 ntBASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 AL360012.1-201ENST00000602813 131 ntBASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 RBPJP2-201ENST00000618187 1444 ntBASIC7.29□□□□□ -1.24
CCDC141Q6ZP82 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 AL592293.2-201ENST00000422292 996 ntBASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 AC091868.1-201ENST00000508746 304 ntBASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 AC026688.1-201ENST00000520639 1168 ntBASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 AC040958.1-201ENST00000561102 201 ntBASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 AC139713.2-214ENST00000642059 1811 ntBASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 AL137058.3-201ENST00000624531 3099 ntBASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 ABCC13-202ENST00000463099 3842 ntBASIC7.28□□□□□ -1.24
CCDC141Q6ZP82 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC141Q6ZP82 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC141Q6ZP82 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC141Q6ZP82 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC141Q6ZP82 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC141Q6ZP82 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC141Q6ZP82 RNU4-39P-201ENST00000362455 127 ntBASIC7.27□□□□□ -1.25
CCDC141Q6ZP82 AC097523.2-201ENST00000435551 652 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms