Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM3P06753 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM3P06753 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TPM3P06753 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM3P06753 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TPM3P06753 AC008549.2-201ENST00000333482 706 ntBASIC5.61□□□□□ -1.51
TPM3P06753 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TPM3P06753 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TPM3P06753 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM3P06753 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM3P06753 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM3P06753 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM3P06753 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TPM3P06753 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
TPM3P06753 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TPM3P06753 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.61□□□□□ -1.51
TPM3P06753 CYCSP10-201ENST00000417973 294 ntBASIC5.61□□□□□ -1.51
TPM3P06753 SLC35E1P1-201ENST00000419313 864 ntBASIC5.61□□□□□ -1.51
TPM3P06753 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.61□□□□□ -1.51
TPM3P06753 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM3P06753 RN7SL443P-201ENST00000464331 290 ntBASIC5.61□□□□□ -1.51
TPM3P06753 AL133445.1-201ENST00000467051 452 ntBASIC5.61□□□□□ -1.51
TPM3P06753 AC108751.5-201ENST00000492880 1336 ntBASIC5.61□□□□□ -1.51
TPM3P06753 STMN1P2-201ENST00000508435 439 ntBASIC5.61□□□□□ -1.51
TPM3P06753 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.61□□□□□ -1.51
TPM3P06753 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TPM3P06753 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM3P06753 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM3P06753 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM3P06753 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM3P06753 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM3P06753 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM3P06753 RN7SL176P-201ENST00000580352 264 ntBASIC5.61□□□□□ -1.51
TPM3P06753 MIR4505-201ENST00000582238 73 ntBASIC5.61□□□□□ -1.51
TPM3P06753 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM3P06753 AC140113.4-201ENST00000622087 222 ntBASIC5.61□□□□□ -1.51
TPM3P06753 OR51C1P-202ENST00000641159 1444 ntBASIC5.61□□□□□ -1.51
TPM3P06753 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM3P06753 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM3P06753 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM3P06753 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM3P06753 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.6□□□□□ -1.51
TPM3P06753 MIPEPP2-201ENST00000422560 1819 ntBASIC5.6□□□□□ -1.51
TPM3P06753 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM3P06753 RN7SKP104-201ENST00000362605 328 ntBASIC5.6□□□□□ -1.51
TPM3P06753 RNA5SP335-201ENST00000363817 110 ntBASIC5.6□□□□□ -1.51
TPM3P06753 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.6□□□□□ -1.51
TPM3P06753 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM3P06753 SEPT7P8-201ENST00000413308 775 ntBASIC5.6□□□□□ -1.51
TPM3P06753 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM3P06753 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.6□□□□□ -1.51
TPM3P06753 RPS27P18-201ENST00000431701 247 ntBASIC5.6□□□□□ -1.51
TPM3P06753 EIF1P7-201ENST00000487533 337 ntBASIC5.6□□□□□ -1.51
TPM3P06753 AL117692.1-201ENST00000494283 713 ntBASIC5.6□□□□□ -1.51
TPM3P06753 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM3P06753 GTF2F2P1-201ENST00000511083 675 ntBASIC5.6□□□□□ -1.51
TPM3P06753 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.6□□□□□ -1.51
TPM3P06753 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM3P06753 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TPM3P06753 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.6□□□□□ -1.51
TPM3P06753 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM3P06753 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM3P06753 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.6□□□□□ -1.51
TPM3P06753 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.6□□□□□ -1.51
TPM3P06753 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.6□□□□□ -1.51
TPM3P06753 AL096712.1-201ENST00000614561 159 ntBASIC5.6□□□□□ -1.51
TPM3P06753 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TPM3P06753 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM3P06753 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM3P06753 MAPK10-303ENST00000641324 3959 ntBASIC5.6□□□□□ -1.51
TPM3P06753 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM3P06753 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM3P06753 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
TPM3P06753 CDY3P-201ENST00000454543 1618 ntBASIC5.59□□□□□ -1.51
TPM3P06753 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM3P06753 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM3P06753 RNU1-94P-201ENST00000362627 173 ntBASIC5.59□□□□□ -1.51
TPM3P06753 U3.3-201ENST00000362986 216 ntBASIC5.59□□□□□ -1.51
TPM3P06753 RNU1-83P-201ENST00000363426 164 ntBASIC5.59□□□□□ -1.51
TPM3P06753 RNA5SP372-201ENST00000390836 115 ntBASIC5.59□□□□□ -1.51
TPM3P06753 RNU1-149P-201ENST00000390870 161 ntBASIC5.59□□□□□ -1.51
TPM3P06753 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM3P06753 SDHDP6-201ENST00000414693 480 ntBASIC5.59□□□□□ -1.51
TPM3P06753 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.59□□□□□ -1.51
TPM3P06753 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TPM3P06753 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM3P06753 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM3P06753 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.59□□□□□ -1.51
TPM3P06753 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.59□□□□□ -1.51
TPM3P06753 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM3P06753 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
TPM3P06753 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TPM3P06753 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.59□□□□□ -1.51
TPM3P06753 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.59□□□□□ -1.51
TPM3P06753 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.59□□□□□ -1.51
TPM3P06753 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
TPM3P06753 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
TPM3P06753 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TPM3P06753 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM3P06753 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms