Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COL5A2P05997 AC008758.3-201ENST00000507003 1829 ntBASIC6.43□□□□□ -1.38
COL5A2P05997 RNA5SP388-201ENST00000362584 119 ntBASIC6.43□□□□□ -1.38
COL5A2P05997 RNA5SP28-201ENST00000363841 119 ntBASIC6.43□□□□□ -1.38
COL5A2P05997 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
COL5A2P05997 AL451142.1-201ENST00000375867 775 ntBASIC6.43□□□□□ -1.38
COL5A2P05997 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.43□□□□□ -1.38
COL5A2P05997 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.43□□□□□ -1.38
COL5A2P05997 COX6CP13-201ENST00000428703 226 ntBASIC6.43□□□□□ -1.38
COL5A2P05997 AC091868.1-201ENST00000508746 304 ntBASIC6.43□□□□□ -1.38
COL5A2P05997 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.43□□□□□ -1.38
COL5A2P05997 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.43□□□□□ -1.38
COL5A2P05997 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.43□□□□□ -1.38
COL5A2P05997 AP001781.1-201ENST00000530977 207 ntBASIC6.43□□□□□ -1.38
COL5A2P05997 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A2P05997 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.43□□□□□ -1.38
COL5A2P05997 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
COL5A2P05997 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.43□□□□□ -1.38
COL5A2P05997 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.43□□□□□ -1.38
COL5A2P05997 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A2P05997 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A2P05997 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
COL5A2P05997 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.43□□□□□ -1.38
COL5A2P05997 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A2P05997 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.43□□□□□ -1.38
COL5A2P05997 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A2P05997 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
COL5A2P05997 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A2P05997 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL5A2P05997 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
COL5A2P05997 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 SMG1P6-201ENST00000532337 2930 ntBASIC6.42□□□□□ -1.38
COL5A2P05997 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.42□□□□□ -1.38
COL5A2P05997 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.42□□□□□ -1.38
COL5A2P05997 RPL21P108-201ENST00000413857 481 ntBASIC6.42□□□□□ -1.38
COL5A2P05997 AC097523.2-201ENST00000435551 652 ntBASIC6.42□□□□□ -1.38
COL5A2P05997 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.42□□□□□ -1.38
COL5A2P05997 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL5A2P05997 RN7SKP67-201ENST00000515905 235 ntBASIC6.42□□□□□ -1.38
COL5A2P05997 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.42□□□□□ -1.38
COL5A2P05997 AC100784.1-201ENST00000522790 310 ntBASIC6.42□□□□□ -1.38
COL5A2P05997 MIR3939-201ENST00000582614 106 ntBASIC6.42□□□□□ -1.38
COL5A2P05997 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.42□□□□□ -1.38
COL5A2P05997 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.42□□□□□ -1.38
COL5A2P05997 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.42□□□□□ -1.38
COL5A2P05997 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL5A2P05997 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.42□□□□□ -1.38
COL5A2P05997 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COL5A2P05997 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
COL5A2P05997 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.42□□□□□ -1.38
COL5A2P05997 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL5A2P05997 SNORA73.1-201ENST00000363107 205 ntBASIC6.41□□□□□ -1.38
COL5A2P05997 SNORA48.4-201ENST00000391089 134 ntBASIC6.41□□□□□ -1.38
COL5A2P05997 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A2P05997 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.41□□□□□ -1.38
COL5A2P05997 RPS27AP6-201ENST00000427962 448 ntBASIC6.41□□□□□ -1.38
COL5A2P05997 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.41□□□□□ -1.38
COL5A2P05997 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.41□□□□□ -1.38
COL5A2P05997 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A2P05997 AL049794.2-201ENST00000616301 365 ntBASIC6.41□□□□□ -1.38
COL5A2P05997 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.41□□□□□ -1.38
COL5A2P05997 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.41□□□□□ -1.38
COL5A2P05997 AC120338.1-201ENST00000625074 1541 ntBASIC6.41□□□□□ -1.38
COL5A2P05997 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A2P05997 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
COL5A2P05997 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A2P05997 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A2P05997 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A2P05997 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
COL5A2P05997 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
COL5A2P05997 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A2P05997 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
COL5A2P05997 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A2P05997 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL5A2P05997 SNORA70.6-201ENST00000383934 134 ntBASIC6.41□□□□□ -1.38
COL5A2P05997 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.41□□□□□ -1.38
COL5A2P05997 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A2P05997 LINC00993-201ENST00000420453 540 ntBASIC6.41□□□□□ -1.38
COL5A2P05997 GLUD1P9-201ENST00000420997 1173 ntBASIC6.41□□□□□ -1.38
COL5A2P05997 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A2P05997 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.41□□□□□ -1.38
COL5A2P05997 snoU13.29-201ENST00000459370 104 ntBASIC6.41□□□□□ -1.38
COL5A2P05997 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.41□□□□□ -1.38
COL5A2P05997 SLC25A15P5-201ENST00000508033 253 ntBASIC6.41□□□□□ -1.38
COL5A2P05997 CYCSP29-201ENST00000533731 318 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms