Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL121890.2-201ENST00000617644 465 ntBASIC3.95□□□□□ -1.78
SSSCA1O60232 HOTTIP_3.1-201ENST00000619957 337 ntBASIC3.95□□□□□ -1.78
SSSCA1O60232 AC140113.4-201ENST00000622087 222 ntBASIC3.95□□□□□ -1.78
SSSCA1O60232 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.95□□□□□ -1.78
SSSCA1O60232 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSSCA1O60232 SAMMSON-209ENST00000641222 1100 ntBASIC3.95□□□□□ -1.78
SSSCA1O60232 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
SSSCA1O60232 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SSSCA1O60232 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSSCA1O60232 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.95□□□□□ -1.78
SSSCA1O60232 RBPJP2-201ENST00000618187 1444 ntBASIC3.95□□□□□ -1.78
SSSCA1O60232 OR51C1P-202ENST00000641159 1444 ntBASIC3.95□□□□□ -1.78
SSSCA1O60232 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSSCA1O60232 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.94□□□□□ -1.78
SSSCA1O60232 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.94□□□□□ -1.78
SSSCA1O60232 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSSCA1O60232 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SSSCA1O60232 MIR195-201ENST00000385194 87 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 LYPLA1P3-201ENST00000402650 695 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 RN7SKP240-201ENST00000410583 375 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 RNU2-18P-201ENST00000411224 162 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSSCA1O60232 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC093655.2-201ENST00000425735 631 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 AC012075.1-201ENST00000436549 580 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 RPL36AP39-201ENST00000445859 318 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC3.94□□□□□ -1.78
SSSCA1O60232 TCEA1P1-201ENST00000449716 880 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 OR52E7P-201ENST00000452394 933 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 RPL21P6-201ENST00000479171 504 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC074087.1-201ENST00000512059 724 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC3.94□□□□□ -1.78
SSSCA1O60232 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC112191.2-201ENST00000522428 333 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.94□□□□□ -1.78
SSSCA1O60232 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.94□□□□□ -1.78
SSSCA1O60232 SNORA74C-1-201ENST00000580726 201 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.94□□□□□ -1.78
SSSCA1O60232 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC3.94□□□□□ -1.78
SSSCA1O60232 SUGT1P3-202ENST00000604259 383 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 AL096712.1-201ENST00000614561 159 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 CCL14-204ENST00000622526 472 ntTSL 3 BASIC3.94□□□□□ -1.78
SSSCA1O60232 AC004232.3-201ENST00000622977 525 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSSCA1O60232 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSSCA1O60232 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSSCA1O60232 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SSSCA1O60232 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SSSCA1O60232 TTC39DP-201ENST00000416781 1688 ntBASIC3.94□□□□□ -1.78
SSSCA1O60232 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSSCA1O60232 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SSSCA1O60232 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.93□□□□□ -1.78
SSSCA1O60232 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSSCA1O60232 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SSSCA1O60232 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SSSCA1O60232 RNA5SP372-201ENST00000390836 115 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 VDAC2P1-201ENST00000399358 958 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 AL021331.1-201ENST00000402817 582 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 OR2AM1P-201ENST00000422137 422 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSSCA1O60232 CYCSP12-201ENST00000437729 300 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 AL450263.2-201ENST00000439400 589 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 DNAJA1P5-201ENST00000440278 943 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.93□□□□□ -1.78
SSSCA1O60232 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.93□□□□□ -1.78
SSSCA1O60232 IGHV5-78-201ENST00000450948 295 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.93□□□□□ -1.78
SSSCA1O60232 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.93□□□□□ -1.78
SSSCA1O60232 RN7SL515P-201ENST00000463999 297 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 RPS21P4-201ENST00000487122 248 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 Vault.2-201ENST00000516519 98 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.93□□□□□ -1.78
SSSCA1O60232 AC024940.3-201ENST00000538551 316 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC3.93□□□□□ -1.78
SSSCA1O60232 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.93□□□□□ -1.78
SSSCA1O60232 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC3.93□□□□□ -1.78
SSSCA1O60232 FO393422.1-201ENST00000603908 708 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.93□□□□□ -1.78
SSSCA1O60232 AC073593.1-201ENST00000624500 411 ntBASIC3.93□□□□□ -1.78
SSSCA1O60232 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSSCA1O60232 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSSCA1O60232 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSSCA1O60232 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSSCA1O60232 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms