Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.37□□□□□ -1.55
CCDC188H7C350 RNA5SP90-201ENST00000364801 99 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC188H7C350 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC188H7C350 MIR105-1-201ENST00000385222 81 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 MIR323B-201ENST00000385269 82 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC188H7C350 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC188H7C350 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC188H7C350 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC188H7C350 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC188H7C350 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC188H7C350 AC004980.3-201ENST00000447046 365 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC188H7C350 AC091180.1-201ENST00000462104 372 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 OR52A4P-202ENST00000481634 799 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC188H7C350 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC188H7C350 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC188H7C350 ENPP7P9-201ENST00000514456 627 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 RN7SKP46-201ENST00000515942 234 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC188H7C350 AC011853.1-201ENST00000518911 454 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 AC020937.1-201ENST00000519677 1013 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC188H7C350 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC188H7C350 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC188H7C350 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC188H7C350 BLZF2P-201ENST00000553776 1130 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 NDUFB4P11-201ENST00000560510 395 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 AC116553.2-201ENST00000564203 463 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC188H7C350 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC188H7C350 SNX6P1-201ENST00000601728 1224 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 AC084373.1-201ENST00000603311 235 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 AP005131.7-201ENST00000610087 611 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 AC073575.2-201ENST00000614212 627 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 AC104307.1-201ENST00000616142 196 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 MIR8069-1-201ENST00000616627 86 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 MIR6071-201ENST00000616741 78 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 MIR8069-2-201ENST00000621412 86 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 AC019080.5-201ENST00000624891 757 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC188H7C350 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC188H7C350 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC188H7C350 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC188H7C350 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC188H7C350 RLIMP2-201ENST00000427891 1563 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CCDC188H7C350 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC188H7C350 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC188H7C350 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC188H7C350 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC188H7C350 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC188H7C350 AC092747.4-201ENST00000620519 1861 ntBASIC5.37□□□□□ -1.55
CCDC188H7C350 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC188H7C350 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC188H7C350 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
CCDC188H7C350 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC188H7C350 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC188H7C350 RNA5SP433-201ENST00000364491 114 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 RN7SKP275-201ENST00000364626 301 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC188H7C350 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC188H7C350 RNU6-883P-201ENST00000384597 107 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 AC104297.1-201ENST00000393779 870 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 AL034403.1-201ENST00000399414 885 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 OR4K12P-201ENST00000406538 961 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC188H7C350 AC007563.3-201ENST00000433233 371 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 AC110602.1-201ENST00000437414 318 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC188H7C350 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC188H7C350 HLA-DPA3-207ENST00000454398 229 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 AC093166.2-201ENST00000455969 1017 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC188H7C350 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC188H7C350 AC138866.2-201ENST00000508650 584 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 AC108157.1-201ENST00000510511 539 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 RNA5SP249-201ENST00000516127 99 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
CCDC188H7C350 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC188H7C350 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC188H7C350 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC188H7C350 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC188H7C350 AC122134.1-201ENST00000565664 1104 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC188H7C350 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC188H7C350 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC188H7C350 AC079315.1-201ENST00000602952 623 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 MTCO2P22-201ENST00000603246 681 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 AC000068.2-201ENST00000608816 460 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 Z95327.3-201ENST00000610385 572 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 AL354696.1-201ENST00000614652 497 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC188H7C350 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC188H7C350 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC188H7C350 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CCDC188H7C350 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.36□□□□□ -1.55
CCDC188H7C350 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms