Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 DPRXP4-201ENST00000578053 568 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC011840.5-201ENST00000582125 771 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC024940.4-201ENST00000605507 246 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 MTCO1P1-201ENST00000624263 1081 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC073869.10-201ENST00000642016 354 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AP001642.1-201ENST00000624727 2117 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RNU1-74P-201ENST00000384108 171 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AL390316.1-201ENST00000406279 553 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AL139128.1-201ENST00000413921 941 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AL590762.4-201ENST00000425885 253 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC009238.2-201ENST00000431026 355 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 MRPL35P2-201ENST00000448009 511 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC004980.4-201ENST00000513375 203 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RN7SKP260-201ENST00000516907 149 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC105031.1-201ENST00000518550 476 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC134349.2-201ENST00000535136 910 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC011447.4-201ENST00000587562 111 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC116651.1-201ENST00000609724 556 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 Mico1.1-201ENST00000611698 204 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 LINC01739-205ENST00000641890 573 ntBASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV4S1A1TA0A5B7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.09□□□□□ -1.76
TCRBV4S1A1TA0A5B7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
TCRBV4S1A1TA0A5B7 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.09□□□□□ -1.76
TCRBV4S1A1TA0A5B7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.76
TCRBV4S1A1TA0A5B7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TCRBV4S1A1TA0A5B7 AL731532.2-201ENST00000623542 1953 ntBASIC4.09□□□□□ -1.76
TCRBV4S1A1TA0A5B7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.09□□□□□ -1.76
TCRBV4S1A1TA0A5B7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TCRBV4S1A1TA0A5B7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 AL035079.1-201ENST00000405210 287 ntBASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 RN7SKP16-201ENST00000410180 299 ntBASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 AC063976.2-201ENST00000425667 3556 ntBASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 RBMY2QP-201ENST00000429799 1147 ntBASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 AC000374.1-201ENST00000434698 1745 ntBASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 RPL35AP21-201ENST00000437667 333 ntBASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 ZNF652P1-201ENST00000442420 1309 ntBASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.08□□□□□ -1.76
TCRBV4S1A1TA0A5B7 AL157385.1-201ENST00000446973 268 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms