Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AC091799.1-201ENST00000422823 811 ntBASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
AP4B1Q9Y6B7 AC079598.2-202ENST00000546624 1451 ntBASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 CDV3P1-201ENST00000471403 739 ntBASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
AP4B1Q9Y6B7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 AC069236.1-201ENST00000604339 616 ntBASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 AC008694.1-202ENST00000636953 945 ntBASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.7■□□□□ 0.58
AP4B1Q9Y6B7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 FZD10-202ENST00000539839 3282 ntBASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 AL032819.2-201ENST00000624543 2162 ntBASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 CYP2T1P-201ENST00000432607 1285 ntBASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 NCF1B-203ENST00000435988 1254 ntBASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 AC133552.2-202ENST00000575694 574 ntBASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 OR10C1-204ENST00000622521 1039 ntBASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 PCDHB18P-201ENST00000524813 2368 ntBASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 AC104581.1-202ENST00000635932 2618 ntBASIC18.69■□□□□ 0.58
AP4B1Q9Y6B7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 AL121832.2-201ENST00000610979 668 ntBASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms