Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 MIR2861-201ENST00000636310 90 ntBASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC1Q9Y5R8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAPPC1Q9Y5R8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 TNRC18P3-201ENST00000441896 2691 ntBASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 PKD1P5-201ENST00000532415 10291 ntBASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAPPC1Q9Y5R8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC1Q9Y5R8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms