Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 AL158211.5-201ENST00000623583 2518 ntBASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 AL445675.2-201ENST00000620291 557 ntBASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN16Q9Y5I7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 AL596275.1-201ENST00000423464 877 ntBASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 AC073195.1-201ENST00000607241 877 ntBASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN16Q9Y5I7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 MIR718-201ENST00000390190 70 ntBASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN16Q9Y5I7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 KSR1P1-201ENST00000446298 240 ntBASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 AP002982.1-201ENST00000492365 877 ntBASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms