Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PCDHGA11Q9Y5H2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA11Q9Y5H2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGA11Q9Y5H2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHGA11Q9Y5H2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA11Q9Y5H2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 TFP1-202ENST00000475455 1573 ntBASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 AC004408.2-201ENST00000623613 2777 ntBASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA11Q9Y5H2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 RPS2P52-201ENST00000469610 820 ntBASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA11Q9Y5H2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA11Q9Y5H2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA11Q9Y5H2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms