Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 CR392000.1-201ENST00000624770 1228 ntBASIC21.04■□□□□ 0.96
USP15Q9Y4E8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.04■□□□□ 0.96
USP15Q9Y4E8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 PCDHAC2-203ENST00000615316 3011 ntBASIC21.03■□□□□ 0.96
USP15Q9Y4E8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 WWOX-216ENST00000569818 525 ntBASIC21.03■□□□□ 0.96
USP15Q9Y4E8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP15Q9Y4E8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.02■□□□□ 0.96
USP15Q9Y4E8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP15Q9Y4E8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP15Q9Y4E8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
USP15Q9Y4E8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP15Q9Y4E8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP15Q9Y4E8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 AC010203.1-204ENST00000548782 407 ntBASIC21.01■□□□□ 0.95
USP15Q9Y4E8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
USP15Q9Y4E8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
USP15Q9Y4E8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
USP15Q9Y4E8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21■□□□□ 0.95
USP15Q9Y4E8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21■□□□□ 0.95
USP15Q9Y4E8 KSR1P1-201ENST00000446298 240 ntBASIC21■□□□□ 0.95
USP15Q9Y4E8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
USP15Q9Y4E8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21■□□□□ 0.95
USP15Q9Y4E8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21■□□□□ 0.95
USP15Q9Y4E8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21■□□□□ 0.95
USP15Q9Y4E8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP15Q9Y4E8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP15Q9Y4E8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms